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“Getting Started Using
the National Research Platform”
SoX Monthly Workshop
Remote Presentation
September 29, 2023
Dr. Larry Smarr
Founding Director Emeritus, California Institute for Telecommunications and Information Technology;
Distinguished Professor Emeritus, Dept. of Computer Science and Engineering
Jacobs School of Engineering, UCSD
http://lsmarr.calit2.net
The December 2022 Pacific Research Platform Video
Highlights 3 Different Applications Out of 1000 Nautilus Namespace Projects
Pacific Research Platform Video:
https://pacificresearchplatform.org/media/pacific-research-platform-video/
NSF CC*DNI Grant
$7.3M 10/2015-10/2020
Extended 2 Years – Ended 10/2022
(GDC)
2015-2022: The Pacific Research Platform NSF Grants
Were Built on the CENIC Regional Optical Network
Source: John Hess, CENIC
Supercomputer
Centers
2015-2022: UCSD Designs PRP Data Transfer Nodes (DTNs) --
Flash I/O Network Appliances (FIONAs)
FIONAs Solved the Disk-to-Disk Data Transfer Problem
at Near Full Speed on Best-Effort 10G, 40G and 100G
FIONAs Designed by UCSD’s Phil Papadopoulos, John Graham,
Joe Keefe, and Tom DeFanti
Add Up to 8 Nvidia GPUs Per 2U FIONA
To Add Machine Learning Capability
Up to 240TB Storage
https://nationalresearchplatform.org/fiona/

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Panel Presentation Larry Smarr and Grant Scott MOREnet 2022 Annual Conference October 19, 2022

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Big Data for Information and Communications Technologies Panel Presentation, IEEE GlobeCom 2015, San Diego, CA, December 9, 2015

pacific research platformanalyticscommunication
2018/2019: PRP Game Changer!
Using Google’s Kubernetes to Orchestrate Containers Across the PRP
User
Applications
Clouds
Containers
https://nationalresearchplatform.org/
2023 - The National Research Platform
Unifies The Previous 8 Years of NSF Grants
2023: NRP’s Nautilus is a Multi-Institution Hypercluster
Which Creates a “Cyberinfrastructure Commons”
~200 FIONAs on 30 Partner Campuses
Networked Together at 10-100Gbps
Sept. 29, 2023
The PRPNRP Has Emphasized
Expanding Diversity and Inclusion
The Expansion from PRP in 2015 to the NRP in 2023:
– 6 States Now 45 States
– 19 Campuses Now 135 Campuses
– 9 Minority Serving Institutions Now 24 MSIs
– 2 NSF EPCoR States Now 20 EPSCoR States, 2 Territories, and Wash DC

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This document provides an overview of the development of national research platforms (NRPs) from 1985 to the present, with a focus on the Pacific Research Platform (PRP). It describes the evolution of the PRP from early NSF-funded supercomputing centers to today's distributed cyberinfrastructure utilizing optical networking, containers, Kubernetes, and distributed storage. The PRP now connects over 15 universities across the US and internationally to enable data-intensive science and machine learning applications across multiple domains. Going forward, the document discusses plans to further integrate regional networks and partner with new NSF-funded initiatives to develop the next generation of NRPs through 2025.

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- The Pacific Research Platform (PRP) interconnects campus DMZs across multiple institutions to provide high-speed connectivity for data-intensive research. - The PRP utilizes specialized data transfer nodes called FIONAs that provide disk-to-disk transfer speeds of 10-100Gbps. - Early applications of the PRP include distributing telescope data between UC campuses, connecting particle physics experiments to computing resources, and enabling real-time wildfire sensor data analysis.

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The document discusses the benefits of exercise for mental health. Regular physical activity can help reduce anxiety and depression and improve mood and cognitive functioning. Exercise boosts blood flow, releases endorphins, and promotes changes in the brain which help regulate emotions and stress levels.

global collaborationglobal networksresearch platforms
The Key Role of Regional Optical Network Meetings
to Engage More Campuses in Using NRP
www.thequilt.net/quilt-circle/snapshot-scaling-a-national-research-platform/
See https://nationalresearchplatform.org/events/fourth-national-research-platform-4nrp/
for slides and videos of all 4NRP presentations
Jen Leasure
President & CEO,
The Quilt
Non-MSI
Institutions
Minority Serving
Institutions
EPSCoR
Institutions
NRP’s Nautilus Hypercluster Is Hosted
On Campuses Across the United States Interconnected By Quilt and I2
238 GPUs over CENIC
CSUSB + SDSU
88 GPUs over CENIC
UCI + UCR + UCM + UCSC + UCSB
511 GPUs over CENIC
UCSD + SDSC
21 GPUs over MREN
UIC
184 GPUs over GPN
U. Nebraska-L
8 GPUs over FLR
FAMU
12 GPUs over NYSERNet
NYU
21 GPUs over SoX
Clemson U
9 GPUs over GPN
U S. Dakota + SD State
4 GPUs via
Albuquerque GigaPoP
U New Mexico
12 GPUs over NYSERNet
U Delaware
2 GPUs over OARnet
CWRU
1 GPU over CENIC/PW
U Hawaii
1 GPU over CENIC/PW
U Guam
144 GPUs over NEREN
MGHPCC
8 GPUs over GPN
U Oklahoma
16 GPUs over GPN
U Missouri
12 Campuses Connected by SoX, FLR, or MARIA
Have 1 or More Users Who Have Logged Onto Nautilus
Total: 52 Nautilus Users
6 Campuses Connected by SoX, FLR, or MARIA
Have Created 1 or More Nautilus Namespaces
Total: 17 Nautilus Namespaces

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The document summarizes the Pacific Research Platform (PRP) which connects researchers across multiple universities with high-speed networks and computing resources for big data and machine learning applications. Key points: - PRP connects 15 universities with optical networks, distributed storage devices (FIONAs), and over 350 GPUs for data analysis and AI training. - It allows researchers to rapidly share and analyze large datasets, with one example reducing a workflow from 19 days to 52 minutes. - Other projects using PRP resources include climate modeling, astrophysics simulations, and machine learning courses involving thousands of students.

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Keynote Presentation: Hawaii International Conference on System Sciences - 51 (HICSS-51) Hilton Waikoloa Village Big Island, HI January 5, 2018

In the Last 12 Months, Only 2 Campuses Connected by SoX, FLR, or MARIA
Have Used Nautilus GPUs or CPUs
The NRP Web Site Helps Users
Get Started Using NRP’s Nautilus
https://nationalresearchplatform.org/nautilus/
California State University San Bernardino is an Excellent Example
of How to Help Your Faculty and Students Use NRP
www.csusb.edu/academic-technologies-innovation/xreal-lab-and-high-performance-computing/high-performance-computing
Their Campus HPC Program
Enabled CSUSB Faculty & Students
to Use More NRP GPU-Hours
In the Last 12 Months
Than 8 of the 10 UC Campuses!
The CSUSB HPC Team Is the Major Reason
For CSUSB Having the Largest NRP Utilization of 23 CSUs
• Dr. Sam Sudhakar
– Chief Financial Officer and Vice President, Finance, Technology, & Operations
• Gerard Au
– Chief Information Officer
• Dr. Bradford Owen
– AVP for Faculty Development, Chief Academic Technologies Officer
• Dr. Dung Vu
– HPC Consultant, Analyst/Programmer
• James MacDonell
– HPC Consultant, Information Security Analyst
• Prof. Youngsu Kim
– HPC Faculty Fellow, Asst. Prof. of Mathematics

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The Pacific Research Platform will create a regional "Big Data Freeway System" along the West Coast to support science. It will connect major research institutions with high-speed optical networks, allowing them to share vast amounts of data and computational resources. This will enable new forms of collaborative, data-intensive research for fields like particle physics, astronomy, biomedicine, and earth sciences. The first phase aims to establish a basic networked infrastructure, with later phases advancing capabilities to 100Gbps and beyond with security and distributed technologies.

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The Pacific Research Platform (PRP) is a high-bandwidth global private "cloud" connected to commercial clouds that provides researchers with distributed computing resources. It links Science DMZs at universities across California and beyond using a high-performance network. The PRP utilizes Data Transfer Nodes called FIONAs to transfer data at near full network speeds. It has adopted Kubernetes to orchestrate software containers across its resources. The PRP provides petabytes of distributed storage and hundreds of GPUs for machine learning. It allows researchers to perform data-intensive science across multiple universities much faster than possible individually.

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Invited Remote Keynote High Performance Computing Initiative California State University San Bernardino March 18, 2022

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A Key Reason CSUSB Has The Largest CSU Nautilus Usage:
They Installed and Publicized the JupyterHub “Easy Button”
https://csusb-jupyter.nrp-nautilus.io/hub/login
Slide Adapted from
Prof. Youngsu Kim
Over 150 Total Users!
CSUSB Provides Human and On-Line Support
For Faculty, Students, and Staff to Easily Use JupyterHub to Access NRP
www.csusb.edu/faculty-center-for-excellence/idat/high-performance-computing/jupyterhub-nrp
University of Missouri’s Grant Scott
Has Built a Model Program for Data Intensive Computing and ML/AI Using NRP
https://engineering.missouri.edu/2023/engineers-share-expertise-around-nautilus-with-great-plains-network/
University of Missouri is Leveraging Jupyter Hubs on Nautilus
for STEM & AI/ML Experiential Learning
Has 16 GPUs On-Site Now -
Adding 44 with a New CC* Award

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Opening Keynote The National Research Platform Workshop Montana State University Bozeman, MT August 7, 2017

From NCSA to the National Research Platform
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Invited Seminar National Center for Supercomputing Applications University of Illinois Urbana-Champaign May 9, 2024

ncsasupercomputingnational research platform
Customized Jupyter Hubs on Nautilus
Support Multiple Courses and Certificates
– Computer Science Undergraduate Classes
– Computer Science HPC Classes
– Undergraduate Data Science
– HPC Emphasis Graduate Data Science
– State & Federal Government Training Programs
UCSD Recently Submitted an NSF Proposal
With FAMU and Mizzou’s Scott Grant Driving Outreach
PI Tom DeFanti, UCSD
“Florida A&M University (FAMU) will host equipment,
train CISE campus researchers and students,
and design custom outreach mechanisms
for the Southeast U.S.”
NRP Support and Community:
• US National Science Foundation (NSF) awards and subawards to UCSD
--CNS-1456638, CNS-1730158, CNS-2100237, CNS-2120019
--ACI-1540112, ACI-1541349, OAC-1826967, OAC-2029306, OAC-2112167
• DOD DURIP awards to UCSD
• UC Office of the President, Calit2 and Calit2’s UCSD Qualcomm Institute
• San Diego Supercomputer Center and UCSD’s Research IT and Instructional IT
• CENIC, Pacific Wave/PNWGP, StarLight/MREN, The Quilt, Great Plains Network,
NYSERNet, Open Science Grid, Internet2, DOE ESnet, NCAR/UCAR & Wyoming
Supercomputing Center, AWS, Google, Microsoft, Cisco, Juniper, Arista

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Getting Started Using the National Research Platform

  • 1. “Getting Started Using the National Research Platform” SoX Monthly Workshop Remote Presentation September 29, 2023 Dr. Larry Smarr Founding Director Emeritus, California Institute for Telecommunications and Information Technology; Distinguished Professor Emeritus, Dept. of Computer Science and Engineering Jacobs School of Engineering, UCSD http://lsmarr.calit2.net
  • 2. The December 2022 Pacific Research Platform Video Highlights 3 Different Applications Out of 1000 Nautilus Namespace Projects Pacific Research Platform Video: https://pacificresearchplatform.org/media/pacific-research-platform-video/
  • 3. NSF CC*DNI Grant $7.3M 10/2015-10/2020 Extended 2 Years – Ended 10/2022 (GDC) 2015-2022: The Pacific Research Platform NSF Grants Were Built on the CENIC Regional Optical Network Source: John Hess, CENIC Supercomputer Centers
  • 4. 2015-2022: UCSD Designs PRP Data Transfer Nodes (DTNs) -- Flash I/O Network Appliances (FIONAs) FIONAs Solved the Disk-to-Disk Data Transfer Problem at Near Full Speed on Best-Effort 10G, 40G and 100G FIONAs Designed by UCSD’s Phil Papadopoulos, John Graham, Joe Keefe, and Tom DeFanti Add Up to 8 Nvidia GPUs Per 2U FIONA To Add Machine Learning Capability Up to 240TB Storage https://nationalresearchplatform.org/fiona/
  • 5. 2018/2019: PRP Game Changer! Using Google’s Kubernetes to Orchestrate Containers Across the PRP User Applications Clouds Containers
  • 6. https://nationalresearchplatform.org/ 2023 - The National Research Platform Unifies The Previous 8 Years of NSF Grants
  • 7. 2023: NRP’s Nautilus is a Multi-Institution Hypercluster Which Creates a “Cyberinfrastructure Commons” ~200 FIONAs on 30 Partner Campuses Networked Together at 10-100Gbps Sept. 29, 2023
  • 8. The PRPNRP Has Emphasized Expanding Diversity and Inclusion The Expansion from PRP in 2015 to the NRP in 2023: – 6 States Now 45 States – 19 Campuses Now 135 Campuses – 9 Minority Serving Institutions Now 24 MSIs – 2 NSF EPCoR States Now 20 EPSCoR States, 2 Territories, and Wash DC
  • 9. The Key Role of Regional Optical Network Meetings to Engage More Campuses in Using NRP www.thequilt.net/quilt-circle/snapshot-scaling-a-national-research-platform/ See https://nationalresearchplatform.org/events/fourth-national-research-platform-4nrp/ for slides and videos of all 4NRP presentations Jen Leasure President & CEO, The Quilt
  • 10. Non-MSI Institutions Minority Serving Institutions EPSCoR Institutions NRP’s Nautilus Hypercluster Is Hosted On Campuses Across the United States Interconnected By Quilt and I2 238 GPUs over CENIC CSUSB + SDSU 88 GPUs over CENIC UCI + UCR + UCM + UCSC + UCSB 511 GPUs over CENIC UCSD + SDSC 21 GPUs over MREN UIC 184 GPUs over GPN U. Nebraska-L 8 GPUs over FLR FAMU 12 GPUs over NYSERNet NYU 21 GPUs over SoX Clemson U 9 GPUs over GPN U S. Dakota + SD State 4 GPUs via Albuquerque GigaPoP U New Mexico 12 GPUs over NYSERNet U Delaware 2 GPUs over OARnet CWRU 1 GPU over CENIC/PW U Hawaii 1 GPU over CENIC/PW U Guam 144 GPUs over NEREN MGHPCC 8 GPUs over GPN U Oklahoma 16 GPUs over GPN U Missouri
  • 11. 12 Campuses Connected by SoX, FLR, or MARIA Have 1 or More Users Who Have Logged Onto Nautilus Total: 52 Nautilus Users
  • 12. 6 Campuses Connected by SoX, FLR, or MARIA Have Created 1 or More Nautilus Namespaces Total: 17 Nautilus Namespaces
  • 13. In the Last 12 Months, Only 2 Campuses Connected by SoX, FLR, or MARIA Have Used Nautilus GPUs or CPUs
  • 14. The NRP Web Site Helps Users Get Started Using NRP’s Nautilus https://nationalresearchplatform.org/nautilus/
  • 15. California State University San Bernardino is an Excellent Example of How to Help Your Faculty and Students Use NRP www.csusb.edu/academic-technologies-innovation/xreal-lab-and-high-performance-computing/high-performance-computing Their Campus HPC Program Enabled CSUSB Faculty & Students to Use More NRP GPU-Hours In the Last 12 Months Than 8 of the 10 UC Campuses!
  • 16. The CSUSB HPC Team Is the Major Reason For CSUSB Having the Largest NRP Utilization of 23 CSUs • Dr. Sam Sudhakar – Chief Financial Officer and Vice President, Finance, Technology, & Operations • Gerard Au – Chief Information Officer • Dr. Bradford Owen – AVP for Faculty Development, Chief Academic Technologies Officer • Dr. Dung Vu – HPC Consultant, Analyst/Programmer • James MacDonell – HPC Consultant, Information Security Analyst • Prof. Youngsu Kim – HPC Faculty Fellow, Asst. Prof. of Mathematics
  • 17. A Key Reason CSUSB Has The Largest CSU Nautilus Usage: They Installed and Publicized the JupyterHub “Easy Button” https://csusb-jupyter.nrp-nautilus.io/hub/login Slide Adapted from Prof. Youngsu Kim Over 150 Total Users!
  • 18. CSUSB Provides Human and On-Line Support For Faculty, Students, and Staff to Easily Use JupyterHub to Access NRP www.csusb.edu/faculty-center-for-excellence/idat/high-performance-computing/jupyterhub-nrp
  • 19. University of Missouri’s Grant Scott Has Built a Model Program for Data Intensive Computing and ML/AI Using NRP https://engineering.missouri.edu/2023/engineers-share-expertise-around-nautilus-with-great-plains-network/
  • 20. University of Missouri is Leveraging Jupyter Hubs on Nautilus for STEM & AI/ML Experiential Learning Has 16 GPUs On-Site Now - Adding 44 with a New CC* Award
  • 21. Customized Jupyter Hubs on Nautilus Support Multiple Courses and Certificates – Computer Science Undergraduate Classes – Computer Science HPC Classes – Undergraduate Data Science – HPC Emphasis Graduate Data Science – State & Federal Government Training Programs
  • 22. UCSD Recently Submitted an NSF Proposal With FAMU and Mizzou’s Scott Grant Driving Outreach PI Tom DeFanti, UCSD “Florida A&M University (FAMU) will host equipment, train CISE campus researchers and students, and design custom outreach mechanisms for the Southeast U.S.”
  • 23. NRP Support and Community: • US National Science Foundation (NSF) awards and subawards to UCSD --CNS-1456638, CNS-1730158, CNS-2100237, CNS-2120019 --ACI-1540112, ACI-1541349, OAC-1826967, OAC-2029306, OAC-2112167 • DOD DURIP awards to UCSD • UC Office of the President, Calit2 and Calit2’s UCSD Qualcomm Institute • San Diego Supercomputer Center and UCSD’s Research IT and Instructional IT • CENIC, Pacific Wave/PNWGP, StarLight/MREN, The Quilt, Great Plains Network, NYSERNet, Open Science Grid, Internet2, DOE ESnet, NCAR/UCAR & Wyoming Supercomputing Center, AWS, Google, Microsoft, Cisco, Juniper, Arista