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17 Open 45 Closed
17 Open 45 Closed
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Issues list

Add scRNA seq using pseudo bulk
#81 opened Jun 24, 2024 by alexgrent
1
@alexgrent
Prepare for upcoming Seurat v5 release
#80 opened Oct 3, 2023 by Gesmira
ssGSEA FDR?
#79 opened Aug 10, 2023 by domi84
3
plot_gsva_pathway label squished and how to assign specific color
#78 opened Jul 26, 2023 by camilla0801
1
Create function for cluster-level pathway enrichment for scRNA-seq data enhancement New feature or request
#73 opened Feb 22, 2023 by jgriss
@jgriss
Add support for group-wise comparison of scRNA-seq data enhancement New feature or request
#67 opened Oct 2, 2022 by jgriss
Potential bug: Ensure that groups can also be integers bug Something isn't working
#64 opened Jul 21, 2022 by jgriss
@jgriss
Add number of mapped genes in GSVA results enhancement New feature or request
#53 opened Oct 27, 2021 by jgriss
@jgriss
pathway hierarchy for annotating pathways enhancement New feature or request
#48 opened Oct 18, 2021 by bravedu01
@jgriss
1
Check that passed metadata fits expression values in add_dataset enhancement New feature or request
#43 opened Sep 14, 2021 by jgriss
@jgriss
Make mapping results (entities per pathway) available in R enhancement New feature or request
#23 opened Jun 9, 2021 by jgriss
@jgriss
Add group.by parameter to analyse_sc_clusters enhancement New feature or request
#12 opened Aug 27, 2020 by jgriss 1.2.0
@jgriss
Fix Reactome visualization for ssGSEA if size filter is applied bug Something isn't working
#8 opened Mar 21, 2020 by jgriss 1.2.0
@jgriss
Add signature for add_dataset supporting a matrix enhancement New feature or request
#7 opened Mar 21, 2020 by jgriss 1.2.0
@jgriss
Add feature to get members of a specific pathway enhancement New feature or request
#6 opened Mar 13, 2020 by jgriss 1.2.0
@jgriss
Add function to highlight specific pathways in plots enhancement New feature or request
#5 opened Mar 13, 2020 by jgriss 1.2.0
@jgriss
Add support for long running analyses enhancement New feature or request
#4 opened Mar 13, 2020 by jgriss
2 of 3 tasks
1.2.0
@jgriss
ProTip! Exclude everything labeled bug with -label:bug.