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Series GSE122713 Query DataSets for GSE122713
Status Public on Nov 20, 2018
Title scRNA-seq, bulk RNA-seq, and ATAC-seq data from progenitor exhausted and terminally exhausted CD8+ T cells from tumors and chronic viral infection
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 30778252
Submission date Nov 19, 2018
Last update date Mar 25, 2019
Contact name Kevin Bi
E-mail(s) kevin_bi@dfci.harvard.edu
Organization name Dana-Farber Cancer Institute
Department Pediatric Oncology
Lab Haining Lab
Street address 450 Brookline Ave.
City Boston
State/province MA
ZIP/Postal code 02215-5450
Country USA
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (72)
GSM3477862 d10_Tet
GSM3477863 d10_All
GSM3477864 d20_Tet_1
This SuperSeries is composed of the following SubSeries:
GSE122675 10X single-cell RNASeq profiling of tumor-infiltrating CD8+ T-cells from B16-OVA mouse melanoma tumors
GSE122712 10X single-cell RNASeq profiling of GP33-tetramer+ CD8+ T-cells from mice chronically infected with LCMV Clone 13
GSE123235 Bulk RNA-Seq profiling of progenitor exhausted (Slamf6+Tim-3-) and terminally exhausted (Slamf6-Tim-3+) CD8+ T-cells from tumors and chronic viral infection
Relations
BioProject PRJNA506053

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE122713_RAW.tar 7.3 Mb (http)(custom) TAR (of NARROWPEAK)
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