Abstract
Pseudomonas aeruginosa is an opportunistic human pathogen capable of forming biofilms and contaminate medical devices and food. Bacteremia caused by this organism is one of the most serious complications with a mortality rate from 18 to 61%. This study aimed investigate the synergistic effect between recombinant alginate lyase enzyme and bacteriophage TDS 97 in controlling P. aeruginosa biofilm. TDS97 bacteriophage was isolated from municipal wastewater and purified by the Top-Agar method. Electron microscopy revealed that this phage belonged to the Myoviridae family. Evaluation of the effect of phage on P. aeruginosa biofilm showed that phage significantly inhibited both biofilm formation (about 82%) and was able to cause dispersal of biofilm (79%). Alginate lyase enzyme was purified at a concentration of 130 μg/ml. Its antibacterial effects on P. aeruginosa were investigated. The results showed that the enzyme had a significant effect on inhibiting biofilm formation (about 74%) and its dispersion (about 71%). The synergistic effect of phage and enzyme was evaluated and the results showed that these two anti-biofilm effects strengthen each other (> 81% inhibition, > 77% dispersion). The results of this study demonstrated that the use of recombinant alginate lyase enzyme with bacteriophage TDS 97 may provide a suitable therapeutic alternative for controlling P. aeruginosa biofilm.
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Abbreviations
- EPS:
-
Extracellular Polymeric Substances
- eDNA:
-
Extracellular DNA
- LB:
-
Luria-Bertani
- SMB:
-
Sodium chloride, Magnesium sulfate buffer
- TSB:
-
Tryptic Soy Broth
- PBS:
-
Phosphate-Buffered Saline
- FBIC:
-
Fractional index of Biofilm formation Inhibitor Concentration
- FBEC:
-
Fractional index of Biofilm Eradication Concentration
- MOI:
-
Multiplicity of Infection
References
Abedon S (2011) Phage therapy pharmacology: calculating phage dosing. Adv Appl Microbiol 77:1–40
Adnan M, Shah MRA, Jamal M, Jalil F, Andleeb S, Nawaz MA, Pervez S, Hussain T, Shah I, Imran (2020) Isolation and characterization of bacteriophage to control multidrug-resistant Pseudomonas aeruginosa planktonic cells and biofilm. Biologicals 63:89–96
Adriaenssens EM, Brister JR (2017) How to name and classify your phage: an informal guide. Viruses 9(4):70
Alipour M, Suntres ZE, Omri A (2009) Importance of DNase and alginate lyase for enhancing free and liposome encapsulated aminoglycoside activity against Pseudomonas aeruginosa. J Antimicrob Chemother 64(2):317���325
Alkawash MA, Soothill JS, Schiller NL (2006) Alginate lyase enhances antibiotic killing of mucoid Pseudomonas aeruginosa in biofilms. APMIS 114(2):131–138
Alkhulaifi M (2017) Using phage’s to exterminate biofilms. J Med Microb Diagn 6:3
Amarillas L, Rubí-Rangel L, Chaidez C, González-Robles A, Lightbourn-Rojas L, León-Félix J (2017) Isolation and characterization of phiLLS, a novel phage with potential biocontrol agent against multidrug-resistant Escherichia coli. Front Microbiol 8:1355
Anderson G, O’toole GJB (2008) Innate and induced resistance mechanisms of bacterial biofilms. Curr Top Microbiol Immunol 322:85–105
Bayer AS, Speert D, Park S, Tu J, Witt M, Nast C, Norman D (1991) Functional role of mucoid exopolysaccharide (alginate) in antibiotic-induced and polymorphonuclear leukocyte-mediated killing of Pseudomonas aeruginosa. Infect Immun 59(1):302–308
Bayer AS, Park S, Ramos MC, Nast CC, Eftekhar F, Schiller NL (1992) Effects of alginase on the natural history and antibiotic therapy of experimental endocarditis caused by mucoid Pseudomonas aeruginosa. Infect Immun 60(10):3979–3985
Blanco-Cabra N, Paetzold B, Ferrar T, Mazzolini R, Torrents E, Serrano L, LLuch-Senar M (2020) Characterization of different alginate lyases for dissolving Pseudomonas aeruginosa biofilms. Sci Rep 10(1):9390
Casey E, Mahony J, Neve H, Noben J-P, Dal Bello F, van Sinderen D (2015) Novel phage group infecting Lactobacillus delbrueckii subsp. lactis, as revealed by genomic and proteomic analysis of bacteriophage Ldl1. Appl Environ Microbiol 81(4):1319–1326
Christensen BE, Ertesvag H, Beyenal H, Lewandowski Z (2001) Resistance of biofilms containing alginate producing bacteria to disintegration by an alginate degrading enzyme (Algl). Biofouling 17(3):203–210
Chiang WC, Nilsson M, Jensen PØ, Høiby N, Nielsen TE, Givskov M, Tolker-Nielsen T (2013) Extracellular DNA shields against aminoglycosides in Pseudomonas aeruginosa biofilms. Antimicro Agent Chemo 57(5):2352–2361. https://doi.org/10.1128/AAC.00001-13
Colvin KM, Irie Y, Tart CS, Urbano R, Whitney JC, Ryder C, Howell PL, Wozniak DJ, Parsek MR (2012) The Pel and Psl polysaccharides provide Pseudomonas aeruginosa structural redundancy within the biofilm matrix. Environ Microbiol 14(8):1913–1928
Cortés ME, Bonilla JC, Sinisterra RD (2011) Biofilm formation, control and novel strategies for eradication. Sci against Microbial Pathog Commun Curr Res Technol Adv 2:896–905
Costerton W, Veeh R, Shirtliff M, Pasmore M, Post C, Ehrlich G (2003) The application of biofilm science to the study and control of chronic bacterial infections. J Clin Investig 112(10):1466–1477
Danis-Wlodarczyk K, Olszak T, Arabski M, Wasik S, Majkowska-Skrobek G, Augustyniak D, Gula G, Briers Y, Jang HB, Vandenheuvel D (2015) Characterization of the newly isolated lytic bacteriophages KTN6 and KT28 and their efficacy against Pseudomonas aeruginosa biofilm. PLoS ONE 10(5):e0127603
Devaraj A, Buzzo JR, Mashburn-Warren L, Gloag ES, Novotny LA, Stoodley P, Bakaletz LO, Goodman SD (2019) The extracellular DNA lattice of bacterial biofilms is structurally related to Holliday junction recombination intermediates. Proc Nat Acad Sci Uni Stat Am 116(50):25068–25077. https://doi.org/10.1073/pnas.1909017116
Dolatshah L, Tabatabaei M (2021) A phenotypic and molecular investigation of biofilm formation in clinical samples of Pseudomonas aeruginosa. Mol Biol Res Commun 10(4):157
Dong S, Wei TD, Chen XL, Li CY, Wang P, Xie BB, Qin QL, Zhang XY, Pang XH, Zhou BC (2014) Molecular insight into the role of the N-terminal extension in the maturation, substrate recognition, and catalysis of a bacterial alginate lyase from polysaccharide lyase family 18. J Biol Chem 289(43):29558–29569
Donlan RM, Costerton JW (2002) Biofilms: survival mechanisms of clinically relevant microorganisms. Clin Microbiol Rev 15(2):167–193
Eftekhar F, Speert DP (1988) Alginase treatment of mucoid Pseudomonas aeruginosa enhances phagocytosis by human monocyte-derived macrophages. Infect Immun 56(11):2788–2793
Flemming HJ, Wingender J (2010) The biofilm matrix. Nat Rev Microbiol 8:623–633
Franklin MJ, Nivens DE, Weadge JT, Howell PL (2011) Biosynthesis of the Pseudomonas aeruginosa extracellular polysaccharides, alginate, Pel, and Psl. Front Microbiol 2:167
Gacesa P (1992) Enzymic degradation of alginates. Int J Biochem 24(4):545–552
Kifelew GL, Mitchell JG, Speck P (2019) Mini-review: efficacy of lytic bacteriophages on multispecies biofilms. Biofouling 35(4):472–481
Hatch RA, Schiller NL (1998) Alginate lyase promotes diffusion of aminoglycosides through the extracellular polysaccharide of mucoid Pseudomonas aeruginosa. Antimicrob Agents Chemother 42(4):974–977
Herrero M, de los Reyes-Gavilán CG, Caso JL, Suárez JE (1994) Characterization of ø393-A2, a bacteriophage that infects Lactobacillus casei. J Bacteriol 140(10):2585–2590
Ho K (2001) Bacteriophage therapy for bacterial infections: rekindling a memory from the pre-antibiotics era. Perspect Biol Med 44(1):1–16
Høiby N, Johansen HK, Moser C, Song Z, Ciofu O, Kharazmi A (2001) Pseudomonas aeruginosa and the in vitroand in vivo biofilm mode of growth. Microbes Infect 1:23–35
Hurlow J, Couch K, Laforet K, Bolton L, Metcalf D, Bowler P (2015) Clinical biofilms: a challenging frontier in wound care. Adv Wound Care 4(5):295–301
Knezevic P, Obreht D, Curcin S, Petrusic M, Aleksic V, Kostanjsek R, Petrovic O (2011) Phages of Pseudomonas aeruginosa: response to environmental factors and in vitro ability to inhibit bacterial growth and biofilm formation. J Appl Microbiol 111(1):245–254
Laemmli UK (1970) Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227(5259):680–685
Lamppa JW, Griswold KE (2013) Alginate lyase exhibits catalysis-independent biofilm dispersion and antibiotic synergy. Antimicrob Agents Chemother 57(1):137–145
Lamppa JW, Ackerman ME, Lai JI, Scanlon TC, Griswold KE (2011) Genetically engineered alginate lyase-PEG conjugates exhibit enhanced catalytic function and reduced immunoreactivity. PLoS ONE 6(2):e17042
Lee HS, Choi S, Shin H, Lee JH, Choi SH (2014) Vibrio vulnificus bacteriophage SSP002 as a possible biocontrol agent. Appl Environ Microbiol 80(2):515–524
Lewis RE, Diekema D, Messer S, Pfaller M, Klepser ME (2002) Comparison of Etest, chequerboard dilution and time kill studies for the detection of synergy or antagonism between antifungal agents tested against Candida species. J Antimicrob Chemother 49(2):345–351
Liao C, Huang X, Wang Q, Yao D, Lu W (2022) Virulence factors of Pseudomonas aeruginosa and antivirulence strategies to combat its drug resistance. Front Cell Infect Microbiol 12:926758
Mah T-FC, O’Toole GA (2001) Mechanisms of biofilm resistance to antimicrobial agents. Trends Microbiol 9(1):34–39
Mai G, Seow W, Pier G, McCormack J, Thong Y (1993) Suppression of lymphocyte and neutrophil functions by Pseudomonas aeruginosa mucoid exopolysaccharide (alginate): reversal by physicochemical, alginase, and specific monoclonal antibody treatments. Infect Immun 61(2):559–564
Miyazaki M, Obata J, Iwamoto Y, Oda T, Muramatsu T (2001) Calciumsensitive extracellular poly (α-L-guluronate) lyase from a marine bacterium Pseudomonas sp. strain F6: purification and some properties. Fish Sci 67(5):956–964
Odds FC (2003) Synergy, antagonism, and what the chequerboard puts between them. J Antimicrob Chemother 52(1):1–1
Oliveira A, Sousa JC, Silva AC, Melo LD, Sillankorva S (2018) Chestnut honey and bacteriophage application to control Pseudomonas aeruginosa and Escherichia coli biofilms: evaluation in an ex vivo wound model. Front Microbiol 9:1725
Oliveira VC, Bim FL, Monteiro RM, Macedo AP, Santos ES, Silva-Lovato CH, Watanabe E (2020) Identification and characterization of new bacteriophages to control multidrug-resistant Pseudomonas aeruginosa biofilm on endotracheal tubes. Front Microbiol 11:580779
Olszowska-Zaremba N, Borysowski J, Dabrowska K, Górski A (2012) Phage translocation, safety and immunomodulation. In: Hyman P, Abedon ST (eds) Bacteriophages in health and disease. CABI Press, Wallingford, UK, pp 168–184
Percival SL, Suleman L, Vuotto C, Donelli GJ (2015) Healthcare-associated infections, medical devices and biofilms: risk, tolerance and control. J Med Microbiol 64(4):323–334
Pinard MA, Lotlikar SR, Boone CD, Vullo D, Supuran CT, Patrauchan MA, McKenna R (2015) Structure and inhibition studies of a type II beta-carbonic anhydrase psCA3 from Pseudomonas aeruginosa. Bioorg Med Chem 23(15):4831–4838
Qu Y, Daley AJ, Istivan TS, Rouch DA, Deighton MA (2010) Densely adherent growth mode, rather than extracellular polymer substance matrix build-up ability, contributes to high resistance of Staphylococcus epidermidis biofilms to antibiotics. J Antimicrob Chemother 65(7):1405–1411
Raad II, Fang X, Keutgen XM, Jiang Y, Sherertz R, Hachem R (2008) The role of chelators in preventing biofilm formation and catheter-related bloodstream infections. Curr Opin Infect Dis 21(4):385–392
Ramsey DM, Wozniak DJ (2005) Understanding the control of Pseudomonas aeruginosa alginate synthesis and the prospects for management of chronic infections in cystic fibrosis. Mol Microbiol 56(2):309–322
Rezk N, Abdelsattar AS, Elzoghby D, Agwa MM, Abdelmoteleb M, Aly RG, El-Shibiny A (2022) Bacteriophage as a potential therapy to control antibiotic-resistant Pseudomonas aeruginosa infection through topical application onto a full-thickness wound in a rat model. J Genet Eng Biotechnol 20(1):1–16
Russell DW, Sambrook J (2001) Molecular cloning: a laboratory manual, vol 1. Cold Spring Harbor Laboratory Cold Spring Harbor, NY
Secchi E, Savorana G, Vitale A, Eberl L, Stocker R, Rusconi R (2022) The structural role of bacterial eDNA in the formation of biofilm streamers. Proceed National Acad Sci Uni Stat Am 119(12):e2113723119. https://doi.org/10.1073/pnas.2113723119
Sharahi JY, Azimi T, Shariati A, Safari H, Tehrani MK, Hashemi A (2019) Advanced strategies for combating bacterial biofilms. J Cell Physiol 234(9):14689–14708
Sonnenwirth AC (1980) Gradwohl’s clinical laboratory methods and diagnosis. CV Mosby
Stepanović S, Vuković D, Dakić I, Savić B, Švabić-Vlahović MJ (2000) A modified microtiter-plate test for quantification of staphylococcal biofilm formation. J Microbiol Methods 40(2):175–179
Stephenson FJCMBB (2011) Working with bacteriophages. Cal Mol Biol Biotechnol 4:83–98
Tarver T (2009) Biofilms: a threat to food safety. Food Technol 63(2):46–52
Tavafi H, Ali AA, Ghadam P, Gharavi S (2018) Screening, cloning and expression of a novel alginate lyase gene from P. aeruginosa TAG 48 and its antibiofilm effects on P. aeruginosa biofilm. Microb Pathog 124:356–364
Umrao PD, Kumar V, Sagar SS, Kaistha SD (2020) Bacteriophage control for Pseudomonas aeruginosa biofilm formation and eradication. In: Gupta N, Gupta V (eds) Experimental protocols in biotechnology: Springer protocols handbooks. Humana, New York, pp 119–137
Verma V, Harjai K, Chhibber S (2010) Structural changes induced by a lytic bacteriophage make ciprofloxacin effective against older biofilm of Klebsiella pneumoniae. Biofouling 26(6):729–737
Watnick P, Kolter R (2000) Biofilm, city of microbes. J Bacteriol 182(10):2675–2679
Weitere M, Bergfeld T, Rice SA, Matz C, Kjelleberg S (2005) Grazing resistance of Pseudomonas aeruginosa biofilms depends on type of protective mechanism, developmental stage and protozoan feeding mode. Environ Microbiol 7(10):1593–1601
Worley-Morse TO, Zhang L, Gunsch CK (2014) The long-term effects of phage concentration on the inhibition of planktonic bacterial cultures. Environ Sci: Process Impacts 16(1):81–87
Wu K, Fang Z, Guo R, Pan B, Shi W, Yuan S, Guan H, Gong M, Shen B, Shen Q (2015) Pectin enhances bio-control efficacy by inducing colonization and secretion of secondary metabolites by Bacillus amyloliquefaciens SQY 162 in the rhizosphere of tobacco. PLoS ONE 10(5):e0127418
Yarwood JM, Paquette KM, Tikh IB, Volper EM, Greenberg EP (2007) Generation of virulence factor variants in Staphylococcus aureus biofilms. J Bacteriol 189(22):7961–7967
Yonezawa H, Osaki T, Kamiya S (2015) Biofilm formation by Helicobacter pylori and its involvement for antibiotic resistance. Biomed Res Int 2015:914791
Zhang Y, Hu Z (2013) Combined treatment of Pseudomonas aeruginosa biofilms with bacteriophages and chlorine. Biotechnol Bioeng 110(1):286–295
Acknowledgements
The authors would like to acknowledge Dr. Jalalei (Isfahan University of Technology, Iran) for providing the vector pET-28a, and the staff of bacteriology and biotechnology laboratories (Faculty of Veterinary Medicine, Department of Pathobiology, Shiraz, Iran) for providing us technical supports.
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This work was funded by Shiraz University (Grant No. 9430195).
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This study is the major component of the work toward the PhD thesis of the LD supervised by MT. LD conceived and performed the experiments; analyzed and interpreted the data. MS collaborated in bacteriophage isolation and also confirmed the diagnosis of Pseudomonas aeruginosa isolates. LD wrote the first draft of the manuscript. Then, the whole manuscript critically revised by MT. MT helped in planning the project; contributed to revision of the manuscript; supervised the project. All authors read, edited, and approved the final version of the manuscript.
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Dolatshah, L., Tabatabaei, M. & Sadeghpour Mobarakeh, M. Dispersal of Pseudomonas aeruginosa biofilm using TDS97 bacteriophage and recombinant alginate lyase enzyme. J Proteins Proteom (2024). https://doi.org/10.1007/s42485-024-00154-8
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DOI: https://doi.org/10.1007/s42485-024-00154-8