Skip to content
View saketkc's full-sized avatar

Organizations

@oerpub @wysiwhat @biojs @conda-forge @bioconda
Block or Report

Block or report saketkc

Report abuse

Contact GitHub support about this user’s behavior. Learn more about reporting abuse.

Report abuse

Pinned Loading

  1. pysradb pysradb Public

    Package for fetching metadata and downloading data from SRA/ENA/GEO

    Python 301 49

  2. covmuller covmuller Public

    Covmuller is an R-package designed for analysis of SARS-CoV-2 sequencing metadata deposited on GISAID

    R 3

  3. pySCTransform pySCTransform Public

    Python package to perform normalization and variance-stabilization of single-cell data

    Jupyter Notebook 21 10

  4. blog blog Public

    Jupyter Notebook 3

  5. gencode_regions gencode_regions Public

    Extract 3'UTR, 5'UTR, CDS, Promoter, Genes, Introns, Exons from GTF files

    Jupyter Notebook 95 53

  6. smithlabcode/ribotricer smithlabcode/ribotricer Public

    A tool for accurately detecting actively translating ORFs from Ribo-seq data

    Python 29 8