Discussions

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  Multiple subworkflow executions

  PeterP-GH asked Jul 24, 2024 in Q&A · Answered

  

  

  

  

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  Google Cloud Batch executor with private IPs

  siddharthab started Jul 25, 2024 in General

  

  

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  Retrieve the process's “workdir” folder.

  amandine-velt asked Jul 24, 2024 in Q&A · Unanswered

  

  

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  bash: /usr/local/bin/nextflow: Permission denied

  GKerdivel asked Jun 13, 2022 in Q&A · Unanswered

  

  

  

  

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  How can I ensure that processes respect the order of a queue channel?

  Subject-13 asked Jul 20, 2024 in Q&A · Answered

  

  

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  Disable task parallelism

  raygozag started Jul 22, 2024 in General

  

  

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  Delay in recording a task as succeeded

  siddharthab asked Jul 13, 2024 in Q&A · Answered

  

  

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  how do I enable nextflow to read scripts in bin folder?

  complexgenome asked Jan 10, 2024 in Q&A · Closed · Answered

  

  

  

  

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  Peak Memory Usage

  landroutsosAIE asked Jul 5, 2024 in Q&A · Unanswered

  

  

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  Obtain SCM configuration from environment

  jacogasp asked Jul 16, 2024 in Q&A · Unanswered

  

  

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  STAR_salmon raw-counts matrix does not have integers

  alessiaartusi asked Mar 21, 2024 in Q&A · Unanswered

  

  

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  Opinion on module-based publishing

  Midnighter started Jul 9, 2024 in General · Closed

  

  

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  Google Batch: How to selectively disable spot instance for a process

  executor/google-batch

  VasLem asked Jul 10, 2024 in Q&A · Answered

  

  

  

  

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  call process in workflow.onError

  ChenDepp asked Jul 11, 2024 in Q&A · Unanswered

  

  

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  Nested params default subset

  VasLem started Jul 12, 2024 in Ideas

  

  

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  API rate limit exceeded -- Provide your GitHub user name and password to get a higher rate limit

  lily616 asked Nov 21, 2021 in Q&A · Unanswered

  

  

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  Anyway to find the last of process in a nf file?

  Vignesh-Kathirkamar asked Jul 11, 2024 in Q&A · Unanswered

  

  

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  Starting Nextflow in a singularity container and use it to run another singularity container

  anuravi1234 asked Jul 10, 2024 in Q&A · Unanswered

  

  

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  How will the new publishing play with class-based channel values?

  Midnighter asked Jul 9, 2024 in Q&A · Unanswered

  

  

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  GCloud: Mounted directories not writable

  VasLem asked Jul 5, 2024 in Q&A · Unanswered

  

  

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  Software version reporting best practices

  glormph started Mar 14, 2024 in General

  

  

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  Singularity images naming convention and writing permission to cache library

  software/singularity

  LouisLeNezet asked Jul 3, 2024 in Q&A · Unanswered

  

  

  

  

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  nextflow run hangs at wget

  brucemoran asked Jul 2, 2024 in Q&A · Closed · Answered

  

  

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  how to get the number of elements in Channel.fromPath or Channel.fromFilePairs

  ChenDepp asked Jul 2, 2024 in Q&A · Unanswered

  

  

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  Conda environment not working with nextflow

  software/conda

  MarcElosua asked Dec 21, 2023 in Q&A · Closed · Answered

  

  

  

  

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