All Questions
Tagged with venn-diagram plot
28
questions
1
vote
1
answer
32
views
How to plot multiple VennDiagrams in png file from within a function in R
I'm trying to print a series of Venn diagrams (using the VennDiagram package) to a single png file by opening the file, calling the function multiple times, then dev.off(). I can get the plots to ...
- 39
4
votes
1
answer
211
views
How to make a dot density Venn diagram in R?
I have a proteomic dataset with proteins all of which are in set A and some of which fall in sets B, C, and D. Using the r package eulerr, I was able to construct a Venn diagram of to visualize the ...
- 45
1
vote
2
answers
638
views
Creating a Venn diagram with elements outside of circles in R
I'd like to create a Venn diagram with elements that are not contained in either circle. That is, some elements are part of set A, some elements are part of set B, some elements are in the ...
- 77
1
vote
0
answers
94
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How to draw a venn diagram of two sets, with the intersection colored with blue, rest of the area white and borders with black
to draw a venn diagram with colored intersection, legends with border
# Draw a Venn diagram
x <- list(A = 1:3, B = 3:5, C = 5:7)
venn(x, col="black", snames = "AB, BC, CD")
- 11
1
vote
1
answer
126
views
Draw Venn diagram considering a specific treshold in a dataframe in R
I have a DataFrame df1 and I want to make a pairwise Venn diagram.
I want to show the number of overlap of the ENSGs (which should be defined by the treshold Cor > 0.1) from Cor1 and Cor2.
df1 <-...
- 481
0
votes
1
answer
451
views
Color palette for overlapping binary images in R
I have a set of N binary (1-0) images and want to make an image in R which shows how they overlap with one another.
As an example, suppose I had two of these binary images and each binary image ...
- 287
1
vote
1
answer
1k
views
How can I make the legend horizontal in the euler plot in R?
I'm having difficulty styling this euler plot. One of my main issues is that I'd like the legend to be on the bottom, but display the variables horizontally. They look strange stacked vertically.
If ...
1
vote
1
answer
500
views
Is there a way to change background color or color the inverse of the input sets?
I'm working on a shiny app to let students explore the basic probability equations and notation with dynamic Euler (Venn) diagrams responding to changes in probability and displaying the intersection ...
- 13
2
votes
1
answer
497
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VennDiagram: How to hide % overlap labels?
Using the VennDiagram package, I would like to hide some, but not all, percentage overlap labels. For example, in the case below, I would like to keep 55, but remove the two 45 labels:
draw.pairwise....
- 934
1
vote
1
answer
148
views
Is there any way to use parallel to speed up a plotVenn() process?
I am trying to make a Venn diagram with 15 sets. I could do it with 9, using the nVennR package, but I had to plot it 22 times to compact the result.
myV <- createVennObj(nSets = 9, sNames = c( "...
- 9
2
votes
1
answer
695
views
Color palettes in the eulerr package
I really like the eulerr package. It makes beautiful plots. I don't, however, have an eye for color, and would therefore like to use existing color schemes like "viridis" or "magma." Is this possible, ...
- 45
2
votes
1
answer
2k
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Venn diagram for non-numeric entries to be shown in subsets
I have the folowing dataframe:
SET1 SET2 SET3
par1 par2 par1
par2 par3 par2
par3 par4 par5
... ... ...
I would like to make a Venn diagram in that all those 'parX' elements are shown in respective ...
- 150
2
votes
1
answer
464
views
Remove box frame from vennDiagram plot with limma
There is no option with vennDiagram() in the limma package to remove the box frame from the Venn diagram. So can anyone tell me how I can adjust the source code to fix that? I also want to remove the ...
2
votes
1
answer
1k
views
Euler diagram with eulerr in R
I'm trying to plot a Venn diagram using the eulerr package in R.
library(eulerr)
vd <- euler(c("gen"=7,"RC"=1,"PP"=2,"Mixed"=5,"None"=12,"gen&PP"=30,
"gen&PP&RC"=6,"PP&...
- 147
1
vote
2
answers
3k
views
Area proportional 3-way Venn Diagram in R
I read quite a few threads on creating Venn Diagram in R. Is it possible to create a proportional triple Venn Diagram talks about using eulerr package. Venn diagram proportional and color shading with ...
- 4,240