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Tagged with venn-diagram overlap
6
questions
3
votes
1
answer
656
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Overlapping two gene sets ,finding their overlap significance and plotting them
(Fig. 3a, b, Extended Data Fig. 3a, b and Supplementary Table 1).
After 48 h, more than one-third of the transcriptome was
differentially expressed (>5,000 genes; 405 genes encoding for
proteins in ...
0
votes
1
answer
782
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Why in my triple venn diagram, the circles with no overlap, isolated from other circles in R?
Why my circles with no overlap isolated from others?
I want to show there is no overlap between them, but the triple shape of venn diagram completely have changed with mix of two circles and one.
I ...
0
votes
0
answers
23
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Is there an XML-like language (or any language) which allows easy expression of overlapping data?
(This is PROBABLY in the wrong site but I am unsure of where the right site is to assign this question to. Mod(s), please forgive and assist me.)
I have the following sequence:
cdadbcdacdbcbc
I ...
1
vote
1
answer
2k
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Venn Diagram from GRanges
I have granges objects like these( showing two of the four):
> upmd_Hf3a
GRanges object with 398117 ranges and 2 metadata columns:
seqnames ranges strand | type ...
2
votes
2
answers
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Make a Venn diagram of 5 bed files overlapped [closed]
I have to compare the overlap or shared regions for 5 bed files and make a venn diagram of the overlapped regions.
I can use pybedtools but it's for 3 files max. Or I found http://bioinformatics.psb....
0
votes
1
answer
756
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D3.js breaking up overlapping shapes
I'm trying to create a chart, where the input is a list of circles (position and radius) (or better ellipses) and the overlaps of the circles become shapes and a mouseover event can be applied. I also ...