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2
questions
2
votes
1
answer
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substitution matrix based on spatial autocorrelation transformation
I would like to measure the hamming sequence similarity in which the substitution costs are not based on the substitution rates in the observed sequences but based on the spatial autocorrelation ...
- 115
6
votes
1
answer
3k
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An "asymmetric" pairwise distance matrix
Suppose there are three sequences to be compared: a, b, and c. Traditionally, the resulting 3-by-3 pairwise distance matrix is symmetric, indicating that the distance from a to b is equal to the ...
- 1,417