[HTML][HTML] Stochastic mRNA synthesis in mammalian cells
A Raj, CS Peskin, D Tranchina, DY Vargas…�- PLoS biology, 2006 - journals.plos.org
Individual cells in genetically homogeneous populations have been found to express
different numbers of molecules of specific proteins. We investigated the origins of these�…
different numbers of molecules of specific proteins. We investigated the origins of these�…
[HTML][HTML] Single-molecule imaging of transcriptionally coupled and uncoupled splicing
DY Vargas, K Shah, M Batish, M Levandoski, S Sinha…�- Cell, 2011 - cell.com
Introns are removed from pre-mRNAs during transcription while the pre-mRNA is still
tethered to the gene locus via RNA polymerase. However, during alternative splicing, it is�…
tethered to the gene locus via RNA polymerase. However, during alternative splicing, it is�…
Mechanism of mRNA transport in the nucleus
DY Vargas, A Raj, SAE Marras…�- Proceedings of the�…, 2005 - National Acad Sciences
The mechanism of transport of mRNA-protein (mRNP) complexes from transcription sites to
nuclear pores has been the subject of many studies. Using molecular beacons to track�…
nuclear pores has been the subject of many studies. Using molecular beacons to track�…
tRNA-linked molecular beacons for imaging mRNAs in the cytoplasm of living cells
MM Mhlanga, DY Vargas, CW Fung…�- Nucleic acids�…, 2005 - academic.oup.com
When oligonucleotide probes are microinjected into cells to image the distribution of RNAs,
they are rapidly sequestered into the nucleus. As a result, it is difficult to detect mRNAs in the�…
they are rapidly sequestered into the nucleus. As a result, it is difficult to detect mRNAs in the�…
[HTML][HTML] Multiplex real-time PCR assays that measure the abundance of extremely rare mutations associated with cancer
We describe the use of “SuperSelective” primers that enable the detection and quantitation
of somatic mutations whose presence relates to cancer diagnosis, prognosis, and therapy, in�…
of somatic mutations whose presence relates to cancer diagnosis, prognosis, and therapy, in�…
[HTML][HTML] Suppression of wild-type amplification by selectivity enhancing agents in PCR assays that utilize superselective primers for the detection of rare somatic�…
In PCR assays designed to detect rare somatic mutations, SuperSelective primers, by virtue
of their short 3′-foot sequences, selectively initiate synthesis on mutant DNA target�…
of their short 3′-foot sequences, selectively initiate synthesis on mutant DNA target�…
[HTML][HTML] SuperSelective primer pairs for sensitive detection of rare somatic mutations
FR Kramer, DY Vargas�- Scientific reports, 2021 - nature.com
SuperSelective primers, by virtue of their unique design, enable the selective exponential
amplification of rare DNA fragments containing somatic mutations in the presence of�…
amplification of rare DNA fragments containing somatic mutations in the presence of�…
[HTML][HTML] Multiplex SuperSelective PCR assays for the detection and quantitation of rare somatic mutations in liquid biopsies
DY Vargas, S Tyagi, SAE Marras, P Moerzinger…�- The Journal of Molecular�…, 2022 - Elsevier
SuperSelective primers, by virtue of their unique design, enable the simultaneous
identification and quantitation of inherited reference genes and rare somatic mutations in�…
identification and quantitation of inherited reference genes and rare somatic mutations in�…
[PDF][PDF] Supplementary Information for “Stochastic mRNA Synthesis in Mammalian Cells”
A Raj, CS Peskin, D Tranchina, DY Vargas, S Tyagi - 2006 - Citeseer
Here, we describe a stochastic model of gene expression which explains the mRNA bursts
observed in the experiments detailed in the main text. We analyze a model of gene�…
observed in the experiments detailed in the main text. We analyze a model of gene�…
'My boss, the app': Algorithmic management and labour process in delivery platforms in Colombia
DY S�nchez Vargas, OJ Maldonado Casta�eda - wiredspace.wits.ac.za
Work and the activities and technologies that allow any work to be performed seem to be
given issues in contemporary modern market-capitalist economies. However such issues�…
given issues in contemporary modern market-capitalist economies. However such issues�…