The spliceosome is a therapeutic vulnerability in MYC-driven cancer

TYT Hsu, LM Simon, NJ Neill, R Marcotte, A Sayad…�- Nature, 2015 - nature.com
MYC (also known as c-MYC) overexpression or hyperactivation is one of the most common
drivers of human cancer. Despite intensive study, the MYC oncogene remains recalcitrant to�…

A SUMOylation-dependent transcriptional subprogram is required for Myc-driven tumorigenesis

JD Kessler, KT Kahle, T Sun, KL Meerbrey…�- Science, 2012 - science.org
Myc is an oncogenic transcription factor frequently dysregulated in human cancer. To
identify pathways supporting the Myc oncogenic program, we used a genome-wide RNA�…

[HTML][HTML] Decision making at a subcellular level determines the outcome of bacteriophage infection

L Zeng, SO Skinner, C Zong, J Sippy, M Feiss…�- Cell, 2010 - cell.com
When the process of cell-fate determination is examined at single-cell resolution, it is often
observed that individual cells undergo different fates even when subject to identical�…

[HTML][HTML] Single-cell analysis of transcription kinetics across the cell cycle

SO Skinner, H Xu, S Nagarkar-Jaiswal, PR Freire…�- Elife, 2016 - elifesciences.org
Transcription is a highly stochastic process. To infer transcription kinetics for a gene-of-
interest, researchers commonly compare the distribution of mRNA copy-number to the�…

Measuring mRNA copy number in individual Escherichia coli cells using single-molecule fluorescent in situ hybridization

SO Skinner, LA Sep�lveda, H Xu, I Golding�- Nature protocols, 2013 - nature.com
We present a protocol for measuring the absolute number of mRNA molecules from a gene
of interest in individual, chemically fixed Escherichia coli cells. A set of fluorescently labeled�…

Lysogen stability is determined by the frequency of activity bursts from the fate‐determining gene

C Zong, L So, LA Sep�lveda, SO Skinner…�- Molecular systems�…, 2010 - embopress.org
The ability of living cells to maintain an inheritable memory of their gene‐expression state is
key to cellular differentiation. Bacterial lysogeny serves as a simple paradigm for long‐term�…

Stochastic kinetics of nascent RNA

H Xu, SO Skinner, AM Sokac, I Golding�- Physical review letters, 2016 - APS
The stochastic kinetics of transcription is typically inferred from the distribution of RNA
numbers in individual cells. However, cellular RNA reflects additional processes�…

[HTML][HTML] Single-virus tracking reveals a spatial receptor-dependent search mechanism

E Rothenberg, LA Sep�lveda, SO Skinner, L Zeng…�- Biophysical journal, 2011 - cell.com
Viral infection begins with the binding of a virus to a specific target on the surface of the host
cell, followed by viral genome delivery into the host and a continuation of the infection�…

[HTML][HTML] IL-6–targeted therapies to block the cytokine or its receptor drive distinct alterations in T cell function

C Speake, T Habib, K Lambert, C Hundhausen…�- JCI insight, 2022 - ncbi.nlm.nih.gov
Therapeutics that inhibit IL-6 at different points in its signaling pathway are in clinical use, yet
whether the immunological effects of these interventions differ based on their molecular�…

[HTML][HTML] A composite immune signature parallels disease progression across T1D subjects

C Speake, SO Skinner, D Berel, E Whalen, MJ Dufort…�- JCI insight, 2019 - ncbi.nlm.nih.gov
At diagnosis, most people with type 1 diabetes (T1D) produce measurable levels of
endogenous insulin, but the rate at which insulin secretion declines is heterogeneous. To�…