[HTML][HTML] Single mammalian cells compensate for differences in cellular volume and DNA copy number through independent global transcriptional mechanisms

O Padovan-Merhar, GP Nair, AG Biaesch, A Mayer…�- Molecular cell, 2015 - cell.com
Individual mammalian cells exhibit large variability in cellular volume, even with the same
absolute DNA content, and so must compensate for differences in DNA concentration in�…

[HTML][HTML] Enrichment of targetable mutations in the relapsed neuroblastoma genome

OM Padovan-Merhar, P Raman, I Ostrovnaya…�- PLoS�…, 2016 - journals.plos.org
Neuroblastoma is characterized by a relative paucity of recurrent somatic mutations at
diagnosis. However, recent studies have shown that the mutational burden increases at�…

[HTML][HTML] Localization and abundance analysis of human lncRNAs at single-cell and single-molecule resolution

MN Cabili, MC Dunagin, PD McClanahan, A Biaesch…�- Genome biology, 2015 - Springer
Abstract Background Long non-coding RNAs (lncRNAs) have been implicated in diverse
biological processes. In contrast to extensive genomic annotation of lncRNA transcripts, far�…

Using variability in gene expression as a tool for studying gene regulation

O Padovan‐Merhar, A Raj�- Wiley Interdisciplinary Reviews�…, 2013 - Wiley Online Library
With the advent of quantitative tools for measuring gene expression in single cells,
researchers have made the discovery that in many contexts, messenger RNA and protein�…

Neural and genetic degeneracy underlies Caenorhabditis elegans feeding behavior

NF Trojanowski, O Padovan-Merhar…�- Journal of�…, 2014 - journals.physiology.org
Degenerate networks, in which structurally distinct elements can perform the same function
or yield the same output, are ubiquitous in biology. Degeneracy contributes to the�…

Stability of DNA-linked nanoparticle crystals: Effect of number of strands, core size, and rigidity of strand attachment

O Padovan-Merhar, FV Lara, FW Starr�- The Journal of chemical�…, 2011 - pubs.aip.org
Three-dimensional ordered lattices of nanoparticles (NPs) linked by DNA have potential
applications in novel devices and materials, but most experimental attempts to form crystals�…

IRK-1 potassium channels mediate peptidergic inhibition of Caenorhabditis elegans serotonin neurons via a Go signaling pathway

L Emtage, S Aziz-Zaman…�- Journal of�…, 2012 - Soc Neuroscience
To identify molecular mechanisms that function in G-protein signaling, we have performed
molecular genetic studies of a simple behavior of the nematode Caenorhabditis elegans�…

[BOOK][B] Single human cells use transcriptional mechanisms to compensate for differences in cell size and DNA content

OM Padovan-Merhar - 2015 - search.proquest.com
Human cells are dynamic: they grow, replicate their genetic information (DNA), and divide.
Clonal populations of cells can display marked heterogeneity in size, leading to significant�…

[PDF][PDF] Stability of DNA-Linked Nanoparticle Crystals

O Padovan-Merhar - 2010 - digitalcollections.wesleyan.edu
First, to Mrs. Sheryl Johnson, who initially inspired me to study physics. If it weren't for you,
this would probably be an English thesis. To my thesis advisor, Prof. Francis Starr, who�…

Cellular volume is a global controller of mRNA abundance

O Padovan-Merhar, A Raj�- Biophysical Journal, 2013 - cell.com
Peter Freddolino, Saeed Tavazoie. Columbia University, New York, NY, USA. The regulation
of gene expression plays a pivotal role in all aspects of biology, from the manner in which�…