User profiles for "author:Cahan P"

Patrick Cahan

Johns Hopkins University School of Medicine
Verified email at jhmi.edu
Cited by 11060

Origins and implications of pluripotent stem cell variability and heterogeneity

P Cahan, GQ Daley�- Nature reviews Molecular cell biology, 2013 - nature.com
Pluripotent stem cells constitute a platform to model disease and developmental processes
and can potentially be used in regenerative medicine. However, not all pluripotent cell lines�…

Understanding development and stem cells using single cell-based analyses of gene expression

P Kumar, Y Tan, P Cahan�- Development, 2017 - journals.biologists.com
In recent years, genome-wide profiling approaches have begun to uncover the molecular
programs that drive developmental processes. In particular, technical advances that enable�…

Epigenetic memory in induced pluripotent stem cells

K Kim, A Doi, B Wen, K Ng, R Zhao, P Cahan, J Kim…�- Nature, 2010 - nature.com
Somatic cell nuclear transfer and transcription-factor-based reprogramming revert adult cells
to an embryonic state, and yield pluripotent stem cells that can generate all tissues. Through�…

Meta-analysis of microarray results: challenges, opportunities, and recommendations for standardization

P Cahan, F Rovegno, D Mooney, JC Newman…�- Gene, 2007 - Elsevier
Microarray profiling of gene expression is a powerful tool for discovery, but the ability to
manage and compare the resulting data can be problematic. Biological, experimental, and�…

[HTML][HTML] CellNet: network biology applied to stem cell engineering

P Cahan, H Li, SA Morris, EL Da Rocha, GQ Daley…�- Cell, 2014 - cell.com
Somatic cell reprogramming, directed differentiation of pluripotent stem cells, and direct
conversions between differentiated cell lineages represent powerful approaches to engineer�…

Chromatin-modifying enzymes as modulators of reprogramming

TT Onder, N Kara, A Cherry, AU Sinha, N Zhu…�- Nature, 2012 - nature.com
Generation of induced pluripotent stem cells (iPSCs) by somatic cell reprogramming
involves global epigenetic remodelling. Whereas several proteins are known to regulate�…

Donor cell type can influence the epigenome and differentiation potential of human induced pluripotent stem cells

K Kim, R Zhao, A Doi, K Ng, J Unternaehrer…�- Nature�…, 2011 - nature.com
We compared bona fide human induced pluripotent stem cells (iPSCs) derived from
umbilical cord blood (CB) cells and neonatal keratinocytes (K). As a consequence of both�…

[HTML][HTML] Hippo pathway activity influences liver cell fate

D Yimlamai, C Christodoulou, GG Galli, K Yanger…�- Cell, 2014 - cell.com
The Hippo-signaling pathway is an important regulator of cellular proliferation and organ
size. However, little is known about the role of this cascade in the control of cell fate�…

Deconstructing transcriptional heterogeneity in pluripotent stem cells

RM Kumar, P Cahan, AK Shalek, R Satija…�- Nature, 2014 - nature.com
Pluripotent stem cells (PSCs) are capable of dynamic interconversion between distinct
substates; however, the regulatory circuits specifying these states and enabling transitions�…

[HTML][HTML] LIN28 regulates stem cell metabolism and conversion to primed pluripotency

J Zhang, S Ratanasirintrawoot, S Chandrasekaran…�- Cell stem cell, 2016 - cell.com
The RNA-binding proteins LIN28A and LIN28B play critical roles in embryonic development,
tumorigenesis, and pluripotency, but their exact functions are poorly understood. Here, we�…