The ImageJ ecosystem: An open platform for biomedical image analysis

J Schindelin, CT Rueden, MC Hiner…�- Molecular�…, 2015 - Wiley Online Library
Technology in microscopy advances rapidly, enabling increasingly affordable, faster, and
more precise quantitative biomedical imaging, which necessitates correspondingly more�…

[HTML][HTML] ImageJ2: ImageJ for the next generation of scientific image data

CT Rueden, J Schindelin, MC Hiner, BE DeZonia…�- BMC�…, 2017 - Springer
Background ImageJ is an image analysis program extensively used in the biological
sciences and beyond. Due to its ease of use, recordable macro language, and extensible�…

Fiji: an open-source platform for biological-image analysis

J Schindelin, I Arganda-Carreras, E Frise, V Kaynig…�- Nature�…, 2012 - nature.com
Fiji is a distribution of the popular open-source software ImageJ focused on biological-image
analysis. Fiji uses modern software engineering practices to combine powerful software�…

The ImageJ ecosystem: Open‐source software for image visualization, processing, and analysis

AB Schroeder, ETA Dobson, CT Rueden…�- Protein�…, 2021 - Wiley Online Library
For decades, biologists have relied on software to visualize and interpret imaging data. As
techniques for acquiring images increase in complexity, resulting in larger multidimensional�…

A hitchhiker's guide through the bio‐image analysis software universe

R Haase, E Fazeli, D Legland, M Doube, S Culley…�- Febs�…, 2022 - Wiley Online Library
Modern research in the life sciences is unthinkable without computational methods for
extracting, quantifying and visualising information derived from microscopy imaging data of�…

Basic image analysis and manipulation in ImageJ

SM Hartig�- Current protocols in molecular biology, 2013 - Wiley Online Library
Image analysis methods have been developed to provide quantitative assessment of
microscopy data. In this unit, basic aspects of image analysis are outlined, including�…

Imagining the future of bioimage analysis

E Meijering, AE Carpenter, H Peng…�- Nature�…, 2016 - nature.com
Modern biological research increasingly relies on image data as a primary source of
information in unraveling the cellular and molecular mechanisms of life. The quantity and�…

Quantitating the cell: turning images into numbers with ImageJ

ET Arena, CT Rueden, MC Hiner…�- Wiley�…, 2017 - Wiley Online Library
Modern biological research particularly in the fields of developmental and cell biology has
been transformed by the rapid evolution of the light microscope. The light microscope, long a�…

The BioImage archive–building a home for life-sciences microscopy data

M Hartley, GJ Kleywegt, A Patwardhan…�- Journal of Molecular�…, 2022 - Elsevier
Despite the huge impact of data resources in genomics and structural biology, until now
there has been no central archive for biological data for all imaging modalities. The�…

ImageJ, a useful tool for biological image processing and analysis

JB Sheffield�- Microscopy and Microanalysis, 2007 - cambridge.org
ImageJ is a Java-based image processing program developed at the NIH by Wayne
Rasband (http://rsb. info. nih. gov/ij/). The program has its origins in an earlier, OS specific�…