Whole-brain anatomical networks: does the choice of nodes matter?

A Zalesky, A Fornito, IH Harding, L Cocchi, M Y�cel…�- Neuroimage, 2010 - Elsevier
Whole-brain anatomical connectivity in living humans can be modeled as a network with
diffusion-MRI and tractography. Network nodes are associated with distinct grey-matter�…

[HTML][HTML] Probabilistic mapping of human functional brain networks identifies regions of high group consensus

A Dworetsky, BA Seitzman, B Adeyemo, M Neta…�- Neuroimage, 2021 - Elsevier
Many recent developments surrounding the functional network organization of the human
brain have focused on data that have been averaged across groups of individuals. While�…

[HTML][HTML] Comparing functional connectivity matrices: A geometry-aware approach applied to participant identification

M Venkatesh, J Jaja, L Pessoa�- NeuroImage, 2020 - Elsevier
Understanding the correlation structure associated with multiple brain measurements
informs about potential “functional groupings” and network organization. The correlation�…

[HTML][HTML] Clinica: An open-source software platform for reproducible clinical neuroscience studies

A Routier, N Burgos, M D�az, M Bacci…�- Frontiers in�…, 2021 - frontiersin.org
We present Clinica (www. clinica. run), an open-source software platform designed to make
clinical neuroscience studies easier and more reproducible. Clinica aims for researchers to�…

[HTML][HTML] Ten simple rules for predictive modeling of individual differences in neuroimaging

D Scheinost, S Noble, C Horien, AS Greene, EMR Lake…�- NeuroImage, 2019 - Elsevier
Establishing brain-behavior associations that map brain organization to phenotypic
measures and generalize to novel individuals remains a challenge in neuroimaging�…

[HTML][HTML] Comparing the similarity and spatial structure of neural representations: a pattern-component model

J Diedrichsen, GR Ridgway, KJ Friston, T Wiestler�- Neuroimage, 2011 - Elsevier
In recent years there has been growing interest in multivariate analyses of neuroimaging
data, which can be used to detect distributed patterns of activity that encode an experimental�…

[HTML][HTML] BrainSpace: a toolbox for the analysis of macroscale gradients in neuroimaging and connectomics datasets

R Vos de Wael, O Benkarim, C Paquola…�- Communications�…, 2020 - nature.com
Understanding how cognitive functions emerge from brain structure depends on quantifying
how discrete regions are integrated within the broader cortical landscape. Recent work�…

[HTML][HTML] Spatial normalization of lesioned brains: performance evaluation and impact on fMRI analyses

J Crinion, J Ashburner, A Leff, M Brett, C Price…�- Neuroimage, 2007 - Elsevier
A key component of group analyses of neuroimaging data is precise and valid spatial
normalization (ie, inter-subject image registration). When patients have structural brain�…

Rank-order versus mean based statistics for neuroimaging

C Rorden, L Bonilha, TE Nichols�- Neuroimage, 2007 - Elsevier
Traditional analysis of neuroimaging data uses parametric statistics, such as the t-test.
These tests are designed to detect mean differences. In fact, even nonparametric techniques�…

Coordinate‐based activation likelihood estimation meta‐analysis of neuroimaging data: A random‐effects approach based on empirical estimates of spatial�…

SB Eickhoff, AR Laird, C Grefkes, LE Wang…�- Human brain�…, 2009 - Wiley Online Library
A widely used technique for coordinate‐based meta‐analyses of neuroimaging data is
activation likelihood estimation (ALE). ALE assesses the overlap between foci based on�…