[HTML][HTML] Daily sampling reveals personalized diet-microbiome associations in humans

AJ Johnson, P Vangay, GA Al-Ghalith, BM Hillmann…�- Cell host &�…, 2019 - cell.com
Diet is a key determinant of human gut microbiome variation. However, the fine-scale
relationships between daily food choices and human gut microbiome composition remain�…

[HTML][HTML] A guide to diet-microbiome study design

AJ Johnson, JJ Zheng, JW Kang, A Saboe…�- Frontiers in�…, 2020 - frontiersin.org
Intense recent interest in understanding how the human gut microbiome influences health
has kindled a concomitant interest in linking dietary choices to microbiome variation. Diet is�…

Impact of individual traits, saturated fat, and protein source on the gut microbiome

JM Lang, C Pan, RM Cantor, WHW Tang…�- MBio, 2018 - Am Soc Microbiol
Interindividual variation in the composition of the human gut microbiome was examined in
relation to demographic and anthropometric traits, and to changes in dietary saturated fat�…

[HTML][HTML] Health and disease markers correlate with gut microbiome composition across thousands of people

O Manor, CL Dai, SA Kornilov, B Smith…�- Nature�…, 2020 - nature.com
Variation in the human gut microbiome can reflect host lifestyle and behaviors and influence
disease biomarker levels in the blood. Understanding the relationships between gut�…

[HTML][HTML] A posteriori dietary patterns better explain variations of the gut microbiome than individual markers in the American Gut Project

A Cotillard, A Cartier-Meheust, NS Litwin…�- The American journal of�…, 2022 - Elsevier
Background Individual diet components and specific dietary regimens have been shown to
impact the gut microbiome. Objectives Here, we explored the contribution of long-term diet�…

MICOM: metagenome-scale modeling to infer metabolic interactions in the gut microbiota

C Diener, SM Gibbons, O Resendis-Antonio�- MSystems, 2020 - Am Soc Microbiol
Compositional changes in the gut microbiota have been associated with a variety of medical
conditions such as obesity, Crohn's disease, and diabetes. However, connecting microbial�…

[HTML][HTML] Dietary selection pressures and their impact on the gut microbiome

G Ecklu-Mensah, J Gilbert, S Devkota�- Cellular and Molecular�…, 2022 - Elsevier
The human gut microbiota harbors a heterogeneous and dynamic community of
microorganisms that coexist with the host to exert a marked influence on human physiology�…

[HTML][HTML] Host lifestyle affects human microbiota on daily timescales

LA David, AC Materna, J Friedman…�- Genome biology, 2014 - Springer
Background Disturbance to human microbiota may underlie several pathologies. Yet, we
lack a comprehensive understanding of how lifestyle affects the dynamics of human�…

[HTML][HTML] Multi-omic analysis of the microbiome and metabolome in healthy subjects reveals microbiome-dependent relationships between diet and metabolites

ZZ Tang, G Chen, Q Hong, S Huang, HM Smith…�- Frontiers in�…, 2019 - frontiersin.org
The human microbiome has been associated with health status, and risk of disease
development. While the etiology of microbiome-mediated disease remains to be fully�…

[HTML][HTML] Tree-based analysis of dietary diversity captures associations between fiber intake and gut microbiota composition in a healthy US adult cohort

ME Kable, EL Chin, D Storms, DG Lemay…�- The Journal of�…, 2022 - Elsevier
Background Diet patterns are a significant and modifiable contributing factor to the
composition of the human gut microbiota. Objectives We set out to identify reproducible�…