We present a detailed description of a new Bioconductor package, phyloseq, for integrated
data and analysis of taxonomically-clustered phylogenetic sequencing data in conjunction�…

Evolview is an interactive tree visualization tool designed to help researchers in visualizing
phylogenetic trees and in annotating these with additional information. It offers the user with�…

Background Ongoing innovation in phylogenetics and evolutionary biology has been
accompanied by a proliferation of software tools, data formats, analytical techniques and�…

EvolView is a web application for visualizing, annotating and managing phylogenetic trees.
First, EvolView is a phylogenetic tree viewer and customization tool; it visualizes trees in�…

Phyutility provides a set of phyloinformatics tools for summarizing and manipulating
phylogenetic trees, manipulating molecular data and retrieving data from NCBI. Its simple�…

Evolview is an online visualization and management tool for customized and annotated
phylogenetic trees. It allows users to visualize phylogenetic trees in various formats�…

Abstract Summary High Throughput Sequencing provides a cost effective means of
generating high resolution data for hundreds or even thousands of strains, and is rapidly�…

Motivation Comparative and evolutionary studies utilize phylogenetic trees to analyze and
visualize biological data. Recently, several web-based tools for the display, manipulation�…

The CIPRES Science Gateway (CSG) provides researchers and educators with browser-
based access to community codes for inference of phylogenetic relationships from DNA and�…

We present the ggtreeExtra package for visualizing heterogeneous data with a phylogenetic
tree in a circular or rectangular layout (https://www. bioconductor. org/packages/ggtreeExtra)�…