[CITATION][C] SP Holmes Exact sequence variants should replace operational taxonomic units in marker-gene data analysis., 2017, 11
BJ Callahan, PJ McMurdie�- DOI: https://doi. org/10.1038/ismej, 2017
[CITATION][C] Phyloseq: handling and analysis of high-throughput microbiome census data
PJ McMurdie, S Holmes, G Jordan, S Chamberlain - 2017
[CITATION][C] Methods in enzymology
JA Navas-Molina, JM Peralta-S�nchez, A Gonz�lez…�- Methods in enzymology�…, 2013
[PDF][PDF] Unusual Codon Bias in Vinyl Chloride
AM Spormann, PJ McMurdie, SF Behrens, S Holmes - Citeseer
Vinyl chloride reductases (VC-RDase) are the key enzymes for complete microbial reductive
dehalogenation of chloroethenes, including the groundwater pollutants tetrachloroethene�…
dehalogenation of chloroethenes, including the groundwater pollutants tetrachloroethene�…
[CITATION][C] Bioconductor workflow for microbiome data analysis: From raw reads to community analyses [Version 2; Peer Review: 3 Approved]. F1000Research 5�…
BJ Callahan, K Sankaran, JA Fukuyama, PJ McMurdie…�- Nucleic Acids Res, 2016
[CITATION][C] an R package for reproducible interactive analysis and graphics of microbiome census data. Watson M, editor
PJ McMurdie, S Holmes, R Kindt, P Legendre…�- PLoS One [Internet]. Public�…, 2013
[CITATION][C] biomformat: An interface package for the BIOM file format. 2020
PJ McMurdie, JN Paulson - 2021
Spatial variation in microbial controls on soil organic matter turnover relative to preferential flow paths
Y Masue-Slowey, K Dhiman…�- AGU Fall Meeting�…, 2012 - ui.adsabs.harvard.edu
Soil is one of the largest dynamic stocks of C on earth. Within soils, nearly 70% of total soil
organic C resides below 30 cm depth, and subsurface C typically has much longer turnover�…
organic C resides below 30 cm depth, and subsurface C typically has much longer turnover�…
[CITATION][C] DADA2: high-resolution sample inference from Illumina amplicon data. Nat Method 13 (7): 581–583
BJ Callahan, PJ McMurdie, MJ Rosen, A Han… - 2016