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2022
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Page 1
CODA: quantitative 3D reconstruction of large tissues at cellular resolution.
Kiemen AL, Braxton AM, Grahn MP, Han KS, Babu JM, Reichel R, Jiang AC, Kim B, Hsu J, Amoa F, Reddy S, Hong SM, Cornish TC, Thompson ED, Huang P, Wood LD, Hruban RH, Wirtz D, Wu PH.
Kiemen AL, et al.
Nat Methods. 2022 Nov;19(11):1490-1499. doi: 10.1038/s41592-022-01650-9. Epub 2022 Oct 24.
Nat Methods. 2022.
PMID: 36280719
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Engineering self-propelled tumor-infiltrating CAR T cells using synthetic velocity receptors.
Johnston AC, Alicea GM, Lee CC, Patel PV, Hanna EA, Vaz E, Forjaz A, Wan Z, Nair PR, Lim Y, Chen T, Du W, Kim D, Nichakawade TD, Rebecca VW, Bonifant CL, Fan R, Kiemen AL, Wu PH, Wirtz D.
Johnston AC, et al.
bioRxiv [Preprint]. 2024 Mar 26:2023.12.13.571595. doi: 10.1101/2023.12.13.571595.
bioRxiv. 2024.
PMID: 38168186
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PanIN or IPMN? Redefining Lesion Size in 3 Dimensions.
Kiemen AL, Dequiedt L, Shen Y, Zhu Y, Matos-Romero V, Forjaz A, Campbell K, Dhana W, Cornish T, Braxton AM, Wu PH, Fishman EK, Wood LD, Wirtz D, Hruban RH.
Kiemen AL, et al.
Am J Surg Pathol. 2024 Jul 1;48(7):839-845. doi: 10.1097/PAS.0000000000002245. Epub 2024 May 20.
Am J Surg Pathol. 2024.
PMID: 38764379
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qMAP enabled microanatomical mapping of human skin aging.
Han KS, Sander IB, Kumer J, Resnick E, Booth C, Cheng G, Im Y, Starich B, Kiemen AL, Phillip JM, Reddy S, Joshu CE, Sunshine JC, Walston JD, Wirtz D, Wu PH.
Han KS, et al.
bioRxiv [Preprint]. 2024 Jul 6:2024.04.03.588011. doi: 10.1101/2024.04.03.588011.
bioRxiv. 2024.
PMID: 39005293
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Three-dimensional assessments are necessary to determine the true, spatially-resolved composition of tissues.
Forjaz A, Vaz E, Romero VM, Joshi S, Braxton AM, Jiang AC, Fujikura K, Cornish T, Hong SM, Hruban RH, Wu PH, Wood LD, Kiemen AL, Wirtz D.
Forjaz A, et al.
bioRxiv [Preprint]. 2024 Mar 28:2023.12.04.569986. doi: 10.1101/2023.12.04.569986.
bioRxiv. 2024.
PMID: 38106231
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Generative interpolation and restoration of images using deep learning for improved 3D tissue mapping.
Joshi S, Forjaz A, Han KS, Shen Y, Queiroga V, Xenes D, Matelsk J, Wester B, Barrutia AM, Kiemen AL, Wu PH, Wirtz D.
Joshi S, et al.
bioRxiv [Preprint]. 2024 Mar 28:2024.03.07.583909. doi: 10.1101/2024.03.07.583909.
bioRxiv. 2024.
PMID: 38496512
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Single-cell morphology encodes functional subtypes of senescence in aging human dermal fibroblasts.
Kamat P, Macaluso N, Min C, Li Y, Agrawal A, Winston A, Pan L, Starich B, Stewart T, Wu PH, Fan J, Walston J, Phillip JM.
Kamat P, et al.
bioRxiv [Preprint]. 2024 May 16:2024.05.10.593637. doi: 10.1101/2024.05.10.593637.
bioRxiv. 2024.
PMID: 38798365
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A disrupted compartment boundary underlies abnormal cardiac patterning and congenital heart defects.
Kathiriya IS, Dominguez MH, Rao KS, Muncie-Vasic JM, Devine WP, Hu KM, Hota SK, Garay BI, Quintero D, Goyal P, Matthews MN, Thomas R, Sukonnik T, Miguel-Perez D, Winchester S, Brower EF, Forjaz A, Wu PH, Wirtz D, Kiemen AL, Bruneau BG.
Kathiriya IS, et al.
bioRxiv [Preprint]. 2024 Mar 4:2024.02.05.578995. doi: 10.1101/2024.02.05.578995.
bioRxiv. 2024.
PMID: 38370632
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