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Gene trajectory inference for single-cell data by optimal transport metrics.
Qu R, Cheng X, Sefik E, Stanley Iii JS, Landa B, Strino F, Platt S, Garritano J, Odell ID, Coifman R, Flavell RA, Myung P, Kluger Y. Qu R, et al. Among authors: strino f. Nat Biotechnol. 2024 Apr 5. doi: 10.1038/s41587-024-02186-3. Online ahead of print. Nat Biotechnol. 2024. PMID: 38580861
Ranking and combining multiple predictors without labeled data.
Parisi F, Strino F, Nadler B, Kluger Y. Parisi F, et al. Among authors: strino f. Proc Natl Acad Sci U S A. 2014 Jan 28;111(4):1253-8. doi: 10.1073/pnas.1219097111. Epub 2014 Jan 13. Proc Natl Acad Sci U S A. 2014. PMID: 24474744 Free PMC article.
LMD: Multiscale Marker Identification in Single-cell RNA-seq Data.
Li R, Qu R, Parisi F, Strino F, Cheng X, Kluger Y. Li R, et al. Among authors: strino f. bioRxiv [Preprint]. 2023 Nov 13:2023.11.12.566780. doi: 10.1101/2023.11.12.566780. bioRxiv. 2023. PMID: 38014159 Free PMC article. Preprint.
Integrated analysis of tumor samples sheds light on tumor heterogeneity.
Parisi F, Micsinai M, Strino F, Ariyan S, Narayan D, Bacchiocchi A, Cheng E, Xu F, Li P, Kluger H, Halaban R, Kluger Y. Parisi F, et al. Among authors: strino f. Yale J Biol Med. 2012 Sep;85(3):347-61. Epub 2012 Sep 25. Yale J Biol Med. 2012. PMID: 23012583 Free PMC article.
21 results