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Gene trajectory inference for single-cell data by optimal transport metrics.
Qu R, Cheng X, Sefik E, Stanley Iii JS, Landa B, Strino F, Platt S, Garritano J, Odell ID, Coifman R, Flavell RA, Myung P, Kluger Y. Qu R, et al. Among authors: cheng x. Nat Biotechnol. 2024 Apr 5. doi: 10.1038/s41587-024-02186-3. Online ahead of print. Nat Biotechnol. 2024. PMID: 38580861
Detection of differentially abundant cell subpopulations in scRNA-seq data.
Zhao J, Jaffe A, Li H, Lindenbaum O, Sefik E, Jackson R, Cheng X, Flavell RA, Kluger Y. Zhao J, et al. Among authors: cheng x. Proc Natl Acad Sci U S A. 2021 Jun 1;118(22):e2100293118. doi: 10.1073/pnas.2100293118. Proc Natl Acad Sci U S A. 2021. PMID: 34001664 Free PMC article.
Two-sample statistics based on anisotropic kernels.
Cheng X, Cloninger A, Coifman RR. Cheng X, et al. Inf inference. 2020 Sep;9(3):677-719. doi: 10.1093/imaiai/iaz018. Epub 2019 Dec 10. Inf inference. 2020. PMID: 32929389 Free PMC article.
A Graph Partitioning Approach to Simultaneous Angular Reconstitution.
Pragier G, Greenberg I, Cheng X, Shkolnisky Y. Pragier G, et al. Among authors: cheng x. IEEE Trans Comput Imaging. 2016 Sep;2(3):323-334. doi: 10.1109/TCI.2016.2557076. Epub 2016 Apr 20. IEEE Trans Comput Imaging. 2016. PMID: 28217720 Free PMC article.
Nucleation of ordered phases in block copolymers.
Cheng X, Lin L, E W, Zhang P, Shi AC. Cheng X, et al. Phys Rev Lett. 2010 Apr 9;104(14):148301. doi: 10.1103/PhysRevLett.104.148301. Epub 2010 Apr 9. Phys Rev Lett. 2010. PMID: 20481967
15,187 results
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