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  1. Beyond the exome: utility of long-read whole genome sequencing in exome-negative autosomal recessive diseases

    Background

    Long-read whole genome sequencing (lrWGS) has the potential to address the technical limitations of exome sequencing in ways not possible...

    Lama AlAbdi, Hanan E. Shamseldin, ... Fowzan S. Alkuraya in Genome Medicine
    Article Open access 14 December 2023
  2. Twist exome capture allows for lower average sequence coverage in clinical exome sequencing

    Background

    Exome and genome sequencing are the predominant techniques in the diagnosis and research of genetic disorders. Sufficient, uniform and...

    Burcu Yaldiz, Erdi Kucuk, ... Patrick May in Human Genomics
    Article Open access 03 May 2023
  3. Whole genome sequencing of families diagnosed with cardiac channelopathies reveals structural variants missed by whole exome sequencing

    Cardiac channelopathies are a group of heritable disorders that affect the heart’s electrical activity due to genetic variations present in genes...

    Vigneshwar Senthivel, Bani Jolly, ... Sridhar Sivasubbu in Journal of Human Genetics
    Article 18 June 2024
  4. Diagnostic uplift through the implementation of short tandem repeat analysis using exome sequencing

    To date, approximately 50 short tandem repeat (STR) disorders have been identified; yet, clinical laboratories rarely conduct STR analysis on exomes....

    Jihoon G. Yoon, Seungbok Lee, ... Jong-Hee Chae in European Journal of Human Genetics
    Article Open access 02 February 2024
  5. The clinical utility of rapid exome sequencing in a consanguineous population

    Background

    The clinical utility of exome sequencing is now well documented. Rapid exome sequencing (RES) is more resource-intensive than regular exome...

    Dorota Monies, Ewa Goljan, ... Fowzan S. Alkuraya in Genome Medicine
    Article Open access 21 June 2023
  6. Long-read sequencing revealing intragenic deletions in exome-negative spastic paraplegias

    Hereditary spastic paraplegias (HSPs) are a heterogeneous group of neurodegenerative disorders characterized by progressive spasticity and weakness...

    Hiromi Fukuda, Takeshi Mizuguchi, ... Naomichi Matsumoto in Journal of Human Genetics
    Article 12 June 2023
  7. Genetic ancestry and diagnostic yield of exome sequencing in a diverse population

    It has been suggested that diagnostic yield (DY) from Exome Sequencing (ES) may be lower among patients with non-European ancestries than those with...

    Yusuph Mavura, Nuriye Sahin-Hodoglugil, ... Neil Risch in npj Genomic Medicine
    Article Open access 03 January 2024
  8. A cost-effective sequencing method for genetic studies combining high-depth whole exome and low-depth whole genome

    Whole genome sequencing (WGS) at high-depth (30X) allows the accurate discovery of variants in the coding and non-coding DNA regions and helps...

    Claude Bhérer, Robert Eveleigh, ... Daniel Taliun in npj Genomic Medicine
    Article Open access 07 February 2024
  9. GATK-gCNV enables the discovery of rare copy number variants from exome sequencing data

    Copy number variants (CNVs) are major contributors to genetic diversity and disease. While standardized methods, such as the genome analysis toolkit...

    Mehrtash Babadi, Jack M. Fu, ... Michael E. Talkowski in Nature Genetics
    Article 21 August 2023
  10. Exome sequencing reveals genetic heterogeneity and clinically actionable findings in children with cerebral palsy

    Cerebral palsy (CP) is the most common motor disability in children. To ascertain the role of major genetic variants in the etiology of CP, we...

    Yangong Wang, Yiran Xu, ... Qinghe Xing in Nature Medicine
    Article 01 May 2024
  11. Exome sequencing identifies breast cancer susceptibility genes and defines the contribution of coding variants to breast cancer risk

    Linkage and candidate gene studies have identified several breast cancer susceptibility genes, but the overall contribution of coding variation to...

    Naomi Wilcox, Martine Dumont, ... Jacques Simard in Nature Genetics
    Article Open access 17 August 2023
  12. Assessment of whole-exome sequencing results in neurogenetic diseases

    Neurogenetic diseases are rare genetic diseases in which neurological findings are prominent. Whole exome sequencing (WES) has led to great advances...

    Özgür Balasar, Müşerref Başdemirci in Journal of Human Genetics
    Article 31 July 2023
  13. Deciphering the host genetic factors conferring susceptibility to severe COVID-19 using exome sequencing

    The COVID-19 pandemic remains a significant public health concern despite the new vaccines and therapeutics. The clinical course of acute SARS-CoV-2...

    Kubra Uslu, Firat Ozcelik, ... Munis Dundar in Genes & Immunity
    Article 20 December 2023
  14. Exome sequencing in undiagnosed congenital myopathy reveals new genes and refines genes–phenotypes correlations

    Background

    Congenital myopathies are severe genetic diseases with a strong impact on patient autonomy and often on survival. A large number of...

    Yvan de Feraudy, Marie Vandroux, ... Jocelyn Laporte in Genome Medicine
    Article Open access 09 July 2024
  15. Whole-exome sequencing reveals candidate high-risk susceptibility genes for endometriosis

    Background

    Endometriosis is a common, chronic disease among fertile-aged women. Disease course may be highly invasive, requiring extensive surgery....

    Susanna Nousiainen, Outi Kuismin, ... Pia Vahteristo in Human Genomics
    Article Open access 03 October 2023
  16. Diagnostic yield of pediatric and prenatal exome sequencing in a diverse population

    The diagnostic yield of exome sequencing (ES) has primarily been evaluated in individuals of European ancestry, with less focus on underrepresented...

    Anne Slavotinek, Shannon Rego, ... Mary E. Norton in npj Genomic Medicine
    Article Open access 26 May 2023
  17. GM2 Gangliosidosis: Whole-Exome Sequencing Reveals Novel Homozygous Pathogenic Variant within the HEXA Gene in Iranian Family

    Abstract

    GM2 gangliosidosis is a hereditary lysosomal storage disorder resulting from mutations in the Hexosaminidase A (HEXA) gene, which leads to a...

    Z. Zargar, M. Maleknia, ... M. Naseroleslami in Russian Journal of Genetics
    Article 01 January 2024
  18. Exome Sequencing: the Search for Mutations Associated with Hereditary Breast and Ovarian Cancers in the Tuvan Ethnic Group (A Pilot Study)

    Whole exome sequencing of peripheral blood samples from Tuvan females diagnosed with breast and ovarian cancers (BC/OC) was performed to search for...

    P. Gervas, A. Molokov, ... N. Cherdyntseva in Bulletin of Experimental Biology and Medicine
    Article 01 April 2024
  19. Converging evidence from exome sequencing and common variants implicates target genes for osteoporosis

    In this study, we leveraged the combined evidence of rare coding variants and common alleles to identify therapeutic targets for osteoporosis. We...

    Sirui Zhou, Olukayode A. Sosina, ... Luca A. Lotta in Nature Genetics
    Article 09 August 2023
  20. Whole-exome sequencing enables rapid and prenatal diagnosis of inherited skin disorders

    Background

    Genodermatoses are a broad group of disorders with specific or non-specific skin-based phenotypes, most of which are monogenic disorders....

    Zhu Xintong, Zhang Kexin, ... Guo Hong in BMC Medical Genomics
    Article Open access 21 August 2023
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