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SigProfilerExtractor allows de novo extraction of mutational signatures from data generated in a matrix format. The tool identifies the n…
- Python
- 148
- Updated on May 10
SigProfilerMatrixGenerator creates mutational matrices for all types of somatic mutations. It allows downsizing the generated mutations o…
- Python
- 96
- Updated yesterday
SigProfilerPlotting provides a standard tool for displaying all types of mutational signatures as well as all types of mutational pattern…
- Python
- 45
- Updated on May 10
SigProfilerSimulator allows realistic simulations of mutational patterns and mutational signatures in cancer genomes. The tool can be use…
- Python
- 18
- Updated on Mar 21
SigProfilerTopography allows evaluating the effect of chromatin organization, histone modifications, transcription factor binding, DNA re…
- Python
- 17
- Updated 28 days ago
An R wrapper for SigProfilerExtractor that allows de novo extraction of mutational signatures from data generated in a matrix format. The…
- R
- 15
- Updated 4 days ago
Tool for analyzing the inter-mutational distances between SNV-SNV and INDEL-INDEL mutations. Tool separates mutations into clustered and …
- Python
- 11
- Updated on Jun 18
Homologous Recombination Profiler (HRProfiler) is a classification tool that predicts the HRD probability for both whole-genome and exome…
- Python
- 1
- Updated 5 days ago
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