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. 2019 Apr 24;21(4):e13822.
doi: 10.2196/13822.

Detecting Developmental Delay and Autism Through Machine Learning Models Using Home Videos of Bangladeshi Children: Development and Validation Study

Affiliations

Detecting Developmental Delay and Autism Through Machine Learning Models Using Home Videos of Bangladeshi Children: Development and Validation Study

Qandeel Tariq et al. J Med Internet Res. .

Abstract

Background: Autism spectrum disorder (ASD) is currently diagnosed using qualitative methods that measure between 20-100 behaviors, can span multiple appointments with trained clinicians, and take several hours to complete. In our previous work, we demonstrated the efficacy of machine learning classifiers to accelerate the process by collecting home videos of US-based children, identifying a reduced subset of behavioral features that are scored by untrained raters using a machine learning classifier to determine children's "risk scores" for autism. We achieved an accuracy of 92% (95% CI 88%-97%) on US videos using a classifier built on five features.

Objective: Using videos of Bangladeshi children collected from Dhaka Shishu Children's Hospital, we aim to scale our pipeline to another culture and other developmental delays, including speech and language conditions.

Methods: Although our previously published and validated pipeline and set of classifiers perform reasonably well on Bangladeshi videos (75% accuracy, 95% CI 71%-78%), this work improves on that accuracy through the development and application of a powerful new technique for adaptive aggregation of crowdsourced labels. We enhance both the utility and performance of our model by building two classification layers: The first layer distinguishes between typical and atypical behavior, and the second layer distinguishes between ASD and non-ASD. In each of the layers, we use a unique rater weighting scheme to aggregate classification scores from different raters based on their expertise. We also determine Shapley values for the most important features in the classifier to understand how the classifiers' process aligns with clinical intuition.

Results: Using these techniques, we achieved an accuracy (area under the curve [AUC]) of 76% (SD 3%) and sensitivity of 76% (SD 4%) for identifying atypical children from among developmentally delayed children, and an accuracy (AUC) of 85% (SD 5%) and sensitivity of 76% (SD 6%) for identifying children with ASD from those predicted to have other developmental delays.

Conclusions: These results show promise for using a mobile video-based and machine learning-directed approach for early and remote detection of autism in Bangladeshi children. This strategy could provide important resources for developmental health in developing countries with few clinical resources for diagnosis, helping children get access to care at an early age. Future research aimed at extending the application of this approach to identify a range of other conditions and determine the population-level burden of developmental disabilities and impairments will be of high value.

Keywords: Bangladesh; Biomedical Data Science; autism; autism spectrum disorder; clinical resources; developmental delays; machine learning.

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Conflict of interest statement

Conflicts of Interest: DPW is the founder of Cognoa.com. This company is developing digital health solutions for pediatric care. All other authors declare no competing interests.

Figures

Figure 1
Figure 1
Results from the top performing classifiers trained on US clinical score sheet data and tested on Bangladeshi data with an objective to distinguish between ASD and non-ASD. ROC: receiver operating characteristic; AUC: area under the curve; ASD: autism spectrum disorder.
Figure 2
Figure 2
(A) ROC curve for layer 1 (distinguishing between children with TD and children with ASD or SLC). (B) ROC curve for layer 2 (distinguishing between ASD and SLC). ASD: autism spectrum disorder; AUC: area under the curve; SLC: speech and language condition; TD: neurotypical development; ROC: receiver operating characteristic.
Figure 3
Figure 3
Shapley value distributions for two of the most important features in the rater-adaptive ensemble model. These features measure the child’s stereotyped behaviors/repetitive interests and eye contact. They demonstrate that clinical intuition and the inner workings of our classifier align closely. ASD: autism spectrum disorder.
Figure 4
Figure 4
Logistic regression (Elastic Net penalty) classifier, trained on Bangladeshi data and tested on US data as well as a held-out test set of the Bangladeshi data. AUC: area under the curve.
Figure 5
Figure 5
Logistic regression (Elastic Net penalty) classifier, trained on US data and tested on Bangladeshi data as well as a held-out test set of the US data.
Figure 6
Figure 6
Feature selection analysis. Numbers within the cells indicate the frequency of selection. (A) Feature frequency comparison during cross-fold validation with alpha value 0.1 between Bangladeshi data and US data. (B) Feature frequency comparison during cross-fold validation with alpha value 0.01 between Bangladeshi data and US data.

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References

    1. Cromer J. U.S. Army. 2018. Apr 05, [2019-04-17]. Autism: fastest-growing developmental disability https://www.army.mil/article/203386/autism_fastest_growing_developmental... .
    1. Baio J, Wiggins J, Christensen DL, Maenner MJ, Daniels J, Warren Z, Kurzius-Spencer M, Zahorodny W, Robinson Rosenberg C, White T, Durkin MS, Imm P, Nikolaou L, Yeargin-Allsopp M, Lee LC, Harrington R, Lopez M, Fitzgerald RT, Hewitt A, Pettygrove S, Constantino JN, Vehorn A, Shenouda J, Hall-Lande J, Van Naarden Braun K, Dowling NF. Prevalence of Autism Spectrum Disorder Among Children Aged 8 Years - Autism and Developmental Disabilities Monitoring Network, 11 Sites, United States, 2014. MMWR Surveill Summ. 2018 Dec 27;67(6):1–23. doi: 10.15585/mmwr.ss6706a1. http://europepmc.org/abstract/MED/29701730 - DOI - PMC - PubMed
    1. Hossain M, Ahmed HU, Jalal Uddin MM, Chowdhury WA, Iqbal MS, Kabir RI, Chowdhury IA, Aftab A, Datta PG, Rabbani G, Hossain SW, Sarker M. Autism Spectrum disorders (ASD) in South Asia: a systematic review. BMC Psychiatry. 2017 Dec 01;17(1):281. doi: 10.1186/s12888-017-1440-x. https://bmcpsychiatry.biomedcentral.com/articles/10.1186/s12888-017-1440-x 10.1186/s12888-017-1440-x - DOI - DOI - PMC - PubMed
    1. Durkin M, Elsabbagh M, Barbaro J, Gladstone M, Happe F, Hoekstra RA, Lee LC, Rattazzi A, Stapel-Wax J, Stone WL, Tager-Flusberg H, Thurm A, Tomlinson M, Shih A. Autism screening and diagnosis in low resource settings: Challenges and opportunities to enhance research and services worldwide. Autism Res. 2015 Oct;8(5):473–6. doi: 10.1002/aur.1575. http://europepmc.org/abstract/MED/26437907 - DOI - PMC - PubMed
    1. Khan N, Muslima H, Shilpi AB, Begum D, Parveen M, Akter N, Ferdous S, Nahar K, McConachie H, Darmstadt GL. Validation of rapid neurodevelopmental assessment for 2- to 5-year-old children in Bangladesh. Pediatrics. 2013 Feb;131(2):e486–94. doi: 10.1542/peds.2011-2421.peds.2011-2421 - DOI - PubMed

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