The Electron Microscopy Data Bank (EMDB) is a public repository for cryogenic-sample Electron Microscopy (cryoEM) volumes and representative tomograms of macromolecular complexes and subcellular structures. It covers a variety of techniques, including single-particle analysis, helical reconstruction, electron tomography, subtomogram averaging, and electron crystallography. More...
As of 17 July 2024, EMDB contains 37053 entries (latest entries, trends).
EMDB News
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06 January 2024: We are delighted to share that EMDB has officially been elevated to a Core Data Resource by ELIXIR, recognising it as a European data resource of fundamental importance to the wider life-science community and the long-term preservation of biological data.
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22 November 2023: We are happy to share the most recent version of the EMDB Nucleic Acids Research paper. The paper describes recent developments and future plans of the EMDB in the context of the worldwide Protein Data Bank. Check it out now! https://doi.org/10.1093/nar/gkad1019
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Recent Entries
(Show all)CryoEM structure of the transketolase ANIP from Streptomyces hygrospinosus
ICP1 Csy-dsDNA-Cas1-Cas2/3 complex (fully assembled form) composited structure with C1 symmetry
Trimeric prM/E spike of Tick-borne encephalitis virus immature particle
Cryo-electron tomogram of small unilamellar vesicles decorated with poliovirus protein 2C
Archaellum filament from the Halobacterium salinarum deltaAgl27 strain
Cryo EM map of the type 2A polymorph of alpha-synuclein at pH 7.0.
Tick-borne encephalitis virus (strain Neudoerfl) immature particle
Archaellum filament from the Halobacterium salinarum deltaAgl26 strain
Structure of human terminal uridylyltransferase 4 (TUT4, ZCCHC11) in complex with pre-let7g miRNA and Lin28A
Subtomogram average of 80S ribosomes in S. cerevisiae under acute glucose starvation
Cryo EM structure of the type 3B polymorph of alpha-synuclein at low pH.
DIV 1 hippocampal neuron (weighted back-projection and greyscale segmentation)
MicroED structure of SARS-CoV-2 main protease (MPro/3CLPro) with missing cone eliminated by suspended drop
ApoRF3 bound to an E. coli non-rotated ribosome termination complex, from focused classification and refinement (State I-B)
Cryo-EM structure of an E. coli non-rotated ribosome termination complex bound with RF1, P- and E-site tRNAPhe (State I-A)
RF3-GDPCP bound to an E. coli rotated ribosome, from focused classification and refinement (State II-C)
Cryo-EM structure of an E. coli non-rotated ribosome termination complex bound with RF1, P- and E-site tRNAPhe (State II-D)
Cryo-EM structure of an E. coli non-rotated ribosome termination complex bound with apoRF3, RF1, P- and E-site tRNAPhe (State I-B)
Cryo-EM structure of an E. coli non-rotated ribosome termination complex bound with RF3-GDPCP, RF1, P- and E-site tRNAPhe (Composite state II-A)
Cryo-EM structure of an E. coli non-rotated ribosome termination complex bound with RF3-GDPCP, RF1, P- and E-site tRNAPhe (State II-A)
Cryo-EM structure of an E. coli rotated ribosome bound with RF3-GDPCP and p/E-tRNAPhe (Composite state II-C)
Phosphorylated, ATP-bound, E1371Q human cystic fibrosis transmembrane conductance regulator (E1371Q-CFTR)
Cryo-EM structure of alpha5beta1 integrin in complex with NeoNectin
RF3-GDPCP bound to an E. coli rotated ribosome, from focused classification and refinement (State II-B)
Cryo-EM structure of an E. coli non-rotated ribosome termination complex bound with apoRF3, RF1, P- and E-site tRNAPhe (Composite state I-B)
Cryo-EM structure of an E. coli rotated ribosome bound with RF3-GDPCP and p/E-tRNAPhe (State II-C)
Cryo-EM structure of an E. coli rotated ribosome bound with RF3-GDPCP and p/E-tRNAPhe (Composite state II-B)
Complex of NPR1 ectodomain and REGN5381 Fab in an active-like state with no ANP bound
Cryo-EM structure of an E. coli rotated ribosome bound with RF3-GDPCP and p/E-tRNAPhe (State II-B)
Phosphorylated, ATP-bound, inhibitor 172-bound E1371Q human cystic fibrosis transmembrane conductance regulator
RF3-GDPCP bound to an E. coli non-rotated ribosome termination complex, from focused classification and refinement (State II-A)
Complex of NPR1 ectodomain with ANP plus an allosteric activating antibody, REGN5381
Structure of HCoV-HKU1C spike in the functionally anchored-1up conformation with 1TMPRSS2
Cryo-EM structure of human ABCC4 in complex with ANP-bound in NBD1 and METHOTREXATE
Structure of HCoV-HKU1C spike in the functionally anchored-3up conformation with 3TMPRSS2
Structure of HCoV-HKU1C spike in the functionally anchored-2up conformation with 2TMPRSS2
Structure of HCoV-HKU1A spike in the functionally anchored-3up conformation with 3TMPRSS2
Structure of the sea urchin spSLC9C1 in state-2 w/o cAMP protomer
Local structure of HCoV-HKU1C spike in complex with TMPRSS2 and glycan
Structure of HCoV-HKU1C spike in the functionally anchored-3up conformation with 2TMPRSS2
Local structure of HCoV-HKU1A spike in complex with TMPRSS2 and glycan
Structure of HCoV-HKU1C spike in the glycan-activated-closed conformation
Structure of HCoV-HKU1C spike in the glycan-activated-2up conformation
Structure of HCoV-HKU1C spike in the glycan-activated-1up conformation
Structure of HCoV-HKU1C spike in the glycan-activated-3up conformation
Structure of HCoV-HKU1C spike in the inactive-closed conformation
ICP1 Csy-dsDNA-Cas1-Cas2/3 complex (fully assembled form), C2 symmetry