… Sequencing of bacterial and archaeal genomes has revolutionized our understanding of the
… There are now nearly 1,000 completed bacterial and archaeal genomes available 2 , most …

… Wang and Wu also attempted to … Wu is that our metrics allow us to explicitly evaluate and
rank potential markers in the context of all currently available bacteria and archaeal genome …

… complete bacterial genomes, identified phylum-specific marker genes in 20 bacterial phyla,
and incorporated them into an automated phylogenomic inference application for bacterial …

… diversity for over 20 years and in over 30,000 genome … diversity of the cultured archaeal
and bacterial species, which … genomic catalog of all cultured Bacteria and Archaea by …

… (GEBA) project (Wu et al. 2009) is aimed at systematically filling the gaps of the tree of life …
cell genomics to massively expand the Genomic Encyclopedia of Bacteria and Archaea by …

… We apply single-cell genomics to target and sequence 201 uncultivated archaeal and bacterial
… Here, we present GEBA-MDM, the natural extension of the Genomic Encyclopaedia into …

… of functional genomics, which unite genome content with the biological properties of bacteria
and archaea. The proposed studies will systematically investigate genome function of type …

… phylogeny-driven GEBA (Genomic Encyclopedia of Bacteria and Archaea) program was
successfully initiated (Wu et al. 2009), the increasing numbers of genomes available from …

… trees for different groups of bacterial genomes. Applying ezTree to genomes that were recently
… elucidate taxonomic relationships among newly recovered genomes and existing ones. …

… genomes, an initial BLASTP search was performed against a local database containing all
complete bacterial, archaeal and mitochondrial genomes. … complete bacterial genomes were …