[HTML][HTML] De novo missense variants disrupting protein–protein interactions affect risk for autism through gene co-expression and protein networks in neuronal cell�…

S Chen, J Wang, E Cicek, K Roeder, H Yu, B Devlin�- Molecular autism, 2020 - Springer
Background Whole-exome sequencing studies have been useful for identifying genes that,
when mutated, affect risk for autism spectrum disorder (ASD). Nonetheless, the association�…

An interactome perturbation framework prioritizes damaging missense mutations for developmental disorders

S Chen, R Fragoza, L Klei, Y Liu, J Wang, K Roeder…�- Nature�…, 2018 - nature.com
Identifying disease-associated missense mutations remains a challenge, especially in large-
scale sequencing studies. Here we establish an experimentally and computationally�…

Rare coding variation illuminates the allelic architecture, risk genes, cellular expression patterns, and phenotypic context of autism

JM Fu, FK Satterstrom, M Peng, H Brand, RL Collins…�- MedRxiv, 2021 - medrxiv.org
Individuals with autism spectrum disorder (ASD) or related neurodevelopmental disorders
(NDDs) often carry disruptive mutations in genes that are depleted of functional variation in�…

[HTML][HTML] Protein interaction network of alternatively spliced isoforms from brain links genetic risk factors for autism

R Corominas, X Yang, GN Lin, S Kang, Y Shen…�- Nature�…, 2014 - nature.com
Increased risk for autism spectrum disorders (ASD) is attributed to hundreds of genetic loci.
The convergence of ASD variants have been investigated using various approaches�…

[HTML][HTML] Protein interaction studies in human induced neurons indicate convergent biology underlying autism spectrum disorders

G Pintacuda, YHH Hsu, K Tsafou, KW Li, JM Mart�n…�- Cell Genomics, 2023 - cell.com
Autism spectrum disorders (ASDs) have been linked to genes with enriched expression in
the brain, but it is unclear how these genes converge into cell-type-specific networks. We�…

Novel genes for autism implicate both excitatory and inhibitory cell lineages in risk

FK Satterstrom, JA Kosmicki, J Wang, MS Breen…�- BioRxiv, 2018 - biorxiv.org
We present the largest exome sequencing study to date focused on rare variation in autism
spectrum disorder (ASD)(n= 35,584). Integrating de novo and case-control variation with an�…

[HTML][HTML] An integrative analysis of non-coding regulatory DNA variations associated with autism spectrum disorder

SM Williams, JY An, J Edson, M Watts…�- Molecular�…, 2019 - nature.com
A number of genetic studies have identified rare protein-coding DNA variations associated
with autism spectrum disorder (ASD), a neurodevelopmental disorder with significant�…

Genome-wide prediction and functional characterization of the genetic basis of autism spectrum disorder

A Krishnan, R Zhang, V Yao, CL Theesfeld…�- Nature�…, 2016 - nature.com
Autism spectrum disorder (ASD) is a complex neurodevelopmental disorder with a strong
genetic basis. Yet, only a small fraction of potentially causal genes—about 65 genes out of�…

Autism genetics perturb prenatal neurodevelopment through a hierarchy of broadly-expressed and brain-specific genes

VH Gazestani, AWT Chiang, E Courchesne, NE Lewis�- bioRxiv, 2020 - biorxiv.org
Numerous genes are associated with autism spectrum disorder (ASD); however, it remains
unclear how most ASD risk genes influence neurodevelopment and result in similar traits�…

[HTML][HTML] Networks of neuronal genes affected by common and rare variants in autism spectrum disorders

E Ben-David, S Shifman�- PLoS genetics, 2012 - journals.plos.org
Autism spectrum disorders (ASD) are neurodevelopmental disorders with phenotypic and
genetic heterogeneity. Recent studies have reported rare and de novo mutations in ASD, but�…