[HTML][HTML] Population-scale variability of the human UDP-glycosyltransferase gene family

D Gonz�lez-Padilla, MD Camara, VM Lauschke…�- …�Genetics and Genomics, 2024 - Elsevier
gene family-specific variant effect predictor. This algorithm identified a total of 1208 deleterious
Human genomic data was extracted from 125,748 exome sequences and 15,708 whole-…

Comparative Whole-Genome Sequencing Analysis of In-situ and Invasive Acral Lentiginous Melanoma: Markedly Increased Copy Number Gains of: GAB2:: PAK1�…

…, YD Choi, HJ Shim, Y Choi, IJ Chung…�- The American Journal�…, 2024 - journals.lww.com
… were mapped to the human genome using the iSAAC … genomic variant call format (gVCF)
file that includes all information on these variants. To identify significantly deleterious mutations

[HTML][HTML] Identification of Missense Variants Affecting Carcass Traits for Hanwoo Precision Breeding

DJ Lee, Y Kim, PTN Dinh, Y Chung, D Lee, Y Kim…�- Genes, 2023 - mdpi.com
… the human genome project, advances in whole-genome … by genome-wide panels of SNPs
to enable genomic prediction in … type III domain containing 1 (ANKFN1) showed damaging

Genetics of Hirschsprung's disease

CS Tang, A Karim, Y Zhong, PH Chung…�- Pediatric Surgery�…, 2023 - Springer
… These candidate genes were mostly discovered by statistical enrichment of deleterious
mutations or by segregation analysis in a simplex family. Unlike the HSCR genes identified from …

[HTML][HTML] Artificial intelligence-based approaches for the detection and prioritization of genomic mutations in congenital surgical diseases

Q Lin, PKH Tam, CSM Tang�- Frontiers in Pediatrics, 2023 - frontiersin.org
… -phenotype information on human pathogenic variants from the Human Gene Mutation
Database (HGMD), DeepSEA has the capacity to forecast the deleterious regulatory impacts that …

[HTML][HTML] Monogenic Causes in Familial Stroke Across Intracerebral Hemorrhage and Ischemic Stroke Subtypes Identified by Whole-Exome Sequencing

…, SL Hsu, JY Tsai, HC Huang, CJ Lin, CP Chung…�- Cellular and Molecular�…, 2023 - Springer
… The stop-gain variant is presumed to cause loss of function of the gene at vascular endothelial
tight junctions (Merello et al. 2016). It is predicted to be deleterious by multiple lines of …

[HTML][HTML] Whole genome sequencing reveals population diversity and variation in HIV-1 specific host genes

PK Thami, WT Choga, C Dandara, SJ O'Brien…�- Frontiers in�…, 2023 - frontiersin.org
… The study of human genomes has revolutionized our … We identified deleterious variants in
a list of 24 genes that are all … This resulted in 5 most deleterious mutations within the ACTRT2, …

Exome sequencing in Asian populations identifies rare deficient SMPD1 alleles that increase risk of Parkinson's disease

EGY Chew, Z Liu, Z Li, SJ Chung, MM Lian…�- MedRxiv, 2023 - medrxiv.org
… We used identity-by-descent analysis to identify related … that different mutations within a
gene cause the same damaging … protein-coding genes in the human genome. Correlation of …

Biallelic mutations in pakistani families with autosomal recessive prelingual nonsyndromic hearing loss

…, S Perveen, H Mahreen, W Son, KS Lee, KW Chung�- Genes & Genomics, 2023 - Springer
… This study identified biallelic mutations as the underlying cause of early onset DFNB in six
… MAFs were obtained from several public human genome databases: the GDV, the Exome …

Extending and outlining the genotypic and phenotypic spectrum of novel mutations of NALCN gene in IHPRF1 syndrome: identifying recurrent urinary tract infection

S Tehrani Fateh, S Bagheri, H Sadeghi…�- Neurological�…, 2023 - Springer
… Burrows-Wheeler Aligner (BWA) was used to map the reads to the human genome reference
(hg19 build) after ensuring the elimination of low-quality reads [7]. SAM tools were used to …